Gene Suden_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_0416 
Symbol 
ID3762731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp414019 
End bp416709 
Gene Length2691 bp 
Protein Length896 aa 
Translation table11 
GC content33% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_392932 
Protein GI78776617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAGCT ATTATGTTTA TAGCTCGTTT CTTGGATTTA ATGCAGCACA ACAGCTCCAA 
GAGAGACTAG ACCAGAATAA ACATCTCAAT GAAGCTCTTA GCAATATTGC TCGTGAACGT
GGTATGAGCG CTATGTACCT TGGAAATAAA ACCCGCAATA TTCATAAATC TCTTATTGAG
CAGAGAAAAA TTGTTGATGA GAAGGTAGAG GACTATCTTA AGTATGCACG AAACAACAAA
AGACTCCATA CACACACAAG CAAGAGCAAT AAAGAAGAGT GTCTAGCATG TAGCAATGTC
GATAGTGTAA TTAGTGCAAT AGTAAAAATC AAATCAGTAA GACCTTTAGT TGATGCTCAT
GCAATAGAAT TTAAGGAGAT GTTTATTGAT GCCTATGGCA AAGCTCAAAT AGCATTTATT
AAACAACTTG AACAAATTAC AGAAAATCAA ATAGACAAAG AGGTAAATCA GCTCTATTCA
CTATATATTG CCATGGTTAA TGCTAAAGAA GCCTCTGGGA TTGAGAGAGG ATATATGGCT
TATATTATCT CTCGCTCATC AGAGCTTCAA AGAGATGACC TAAACGAGTG GATATCTCTC
ATAGGTAAAG CAGATTCAAT AAATTACGGA GGTATTCAAA ACAAAAATCT CATTAGTAGT
TTAGATGCGC TTTTTAAAAA TGAGGACAGT TTAGAGCTCT TTGGGGATAT TAATAGCGAA
AGGGCTGCGA TTATTTCCAT CTCTCATAGC GGTGAATATG ATATTACCTC TGGTGTATGG
TTTACGATGC TATCTGAGAA AATAAATATT ATCGCTCAAG CAGAGGATTT ACTCTTAAAT
GCCATGAATA CAAGGGCACA AAAAGTTCAA GAGGAGTCTC TTCAAGTTCT TATAATAACA
TTTAGTGTTT GGTTAATAGC AATTATTCTA GCTGTTTTAG GATTTGTTTT ATCAAATCAA
ATTGCAAAAA ATATTAGAAA CCTTGAGAGT GTATTAGAAA AAGTTGCTGG AGATTATGAC
TCTAAAGAGA GAAAAATAAA TCTACATACT GCTGAGGGCA CTGATTTAGC TTATGAACTT
TTAGAAGACA TTATAGAACA GACAAAAATG GATAAGATAT CGGCTCAAGA AGCGAGTGAA
GCTAAGTCGA TGTTTTTAGC AAATATGTCA CATGAGATTA GAACTCCATT AAATGGTATA
GTTGGATTTA CAGAGCTTCT CAAAGATTCT GGTCTGCAAC AAGAGCAGAG TGAATTTGTT
GATATTATTG AAAAAAGTTC TGAGAATCTT CTTGAAATTA TAAACAACAT TCTTGACCTT
TCTAAAATAG AGAGTAATAA ACTTGAAATT GAAAATATCC TATTTAACCC GATTGTAGAG
TTTGAGAGCG CTGTTGAAGT CTATGCAGTT CGTGCTAGTG AAAAGCATAT TAATCTTGGA
TGCTTTATAG ATCCCAGCCT TGAGTTTTGG CTAAAAGGAG ACCCTACTAA ATTAAAAGAG
ATTATTATAA ATCTTCTCTC AAATGCTGTT AAATTTACAA ATAATGCTGG TTTTATCAAT
GTAAATATAA GAAAAATAGA CTCAGATAAG AGTACAAAAA CAAGAGTTAG ATTTGAGATT
CAAGATAGCG GTATCGGTGT AACTAGTGAG CAAAAATCTA AAATATTTGA AGCATTTTCT
CAAGCAGACA CTTCTATTAC ACGTAAATAT GGAGGAACTG GTCTTGGACT TACAATCTCG
AGCAACTTCG TTGAACTTAT GGGTGGAAAA CTAGATTTAG AAAGTAAACT TGCAGAGGGT
ACAACATTCT TCTTTACTCT TGATTTTGAA AAGGCAGAAA CATTACATGA GACATCAAAA
AACAGTTTTA ATGCTTTGAG CGCTCTTATT TTAAGCGATT CTGAAAAAAT TAAAAAACAA
GATAAGTATC TAAGAGAGTA TCTTGAGTAT TATGGAGTTG GCTTTAAAAC GTTTAATGCA
ATAGAGAAGC TAGAACTTCT ATTAAAAGAT AGTGATTACA ATCTCCTTTT TGTGGATTAT
GACTATACAA GCGAGGAGAC TCTGCGAGAA TTATCGAAAC TTCCTCAAGA GTTAGTAGTT
CTCACAAAAT CAAACTTAAT GAAAAGAGTA GATTCGTTAG GGCTAAACAT CTTTAAAATC
TTATATGAAC CAATTCATGC TTCAAAAATC AGACAAATAC TTGAGAACTA TACTCTTTTG
AATGCTAAAA TAGAAGTCGC TAAAAAATCA TCATGTAAAA ATTTTGATCT TAGTAAATCG
AAATTTATTG CTGATGTTTT GGTTGCGGAA GACAATACCA TTAACCAAAA ACTCATTCAA
AGAACACTTG AAGATTTAGG TCTTAATGTA ACGATTGCAA ATAATGGTTT GGATGCTTTT
CAAAAAAGAA AAGATGGGAA GTTTGATCTA ATATTTATGG ATATTCAGAT GCCATTTCTT
GATGGTGTTG AAGCTACTGC CGAGATTTTA GAGTGGGAGG CTGATTATAA GCAGCCTCAT
GTACCTATTG TTGCACTTAC AGCAAACGCA CTAAAAGGAG ACAGAGAGAA GTTCATCTTA
GCAGGTTTAG ATGAGTACAC AACAAAACCT CTTGTAAGAG CAGAGATTAT TACTATCTTA
AATATGTTTT TAGCAGATTT TATAGTTGAA GTCAATGAGA CAAAGAGTTG A
 
Protein sequence
MTSYYVYSSF LGFNAAQQLQ ERLDQNKHLN EALSNIARER GMSAMYLGNK TRNIHKSLIE 
QRKIVDEKVE DYLKYARNNK RLHTHTSKSN KEECLACSNV DSVISAIVKI KSVRPLVDAH
AIEFKEMFID AYGKAQIAFI KQLEQITENQ IDKEVNQLYS LYIAMVNAKE ASGIERGYMA
YIISRSSELQ RDDLNEWISL IGKADSINYG GIQNKNLISS LDALFKNEDS LELFGDINSE
RAAIISISHS GEYDITSGVW FTMLSEKINI IAQAEDLLLN AMNTRAQKVQ EESLQVLIIT
FSVWLIAIIL AVLGFVLSNQ IAKNIRNLES VLEKVAGDYD SKERKINLHT AEGTDLAYEL
LEDIIEQTKM DKISAQEASE AKSMFLANMS HEIRTPLNGI VGFTELLKDS GLQQEQSEFV
DIIEKSSENL LEIINNILDL SKIESNKLEI ENILFNPIVE FESAVEVYAV RASEKHINLG
CFIDPSLEFW LKGDPTKLKE IIINLLSNAV KFTNNAGFIN VNIRKIDSDK STKTRVRFEI
QDSGIGVTSE QKSKIFEAFS QADTSITRKY GGTGLGLTIS SNFVELMGGK LDLESKLAEG
TTFFFTLDFE KAETLHETSK NSFNALSALI LSDSEKIKKQ DKYLREYLEY YGVGFKTFNA
IEKLELLLKD SDYNLLFVDY DYTSEETLRE LSKLPQELVV LTKSNLMKRV DSLGLNIFKI
LYEPIHASKI RQILENYTLL NAKIEVAKKS SCKNFDLSKS KFIADVLVAE DNTINQKLIQ
RTLEDLGLNV TIANNGLDAF QKRKDGKFDL IFMDIQMPFL DGVEATAEIL EWEADYKQPH
VPIVALTANA LKGDREKFIL AGLDEYTTKP LVRAEIITIL NMFLADFIVE VNETKS