Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4258 |
Symbol | |
ID | 6179505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1316837 |
End bp | 1318828 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641684027 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001810938 |
Protein GI | 172063287 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.267585 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGACCT TTACCCGTGA GCTGTTTCGG CAGGGCATAT GGGTCGTGCT GGCCGTCGGG GTGGCGGCCG TGCTGCAGGC GTGGGCGATC CACGTCATCG GCATGCATGA ACCGTTCGCG CCGCTGCCTT TCTACGCCGG TGTCGCGGCT GCGGCCTGGC TGACGTCGTT TGCCGGCGGC GTCGCCGCGA GCGCCGTGAG CCTCGCCGTG ATCGGCGGCC TGTGGTGGCG CAATATGCCG CTGCCCGATC TCCTCTCCCA GGCCGGCGCT TTCGTCGCGA TCAGCTTCGT CGAGTGCGTG CTCGTGATGG CCGTCAAGCC GCTGCTCGCC AACGACCGCT TGCGCGGCGC CGAGGATGCG GAAGAGGGCA ACGCGCGCAC ACCGCGCCGC GAACCTGAAC CTGGAAGCCT GGCGCGCTCG GTCGATGACA CAGTGCTGCG CCGCGTGGTC GATGCATCGC CCGACGCGAT CGTCGGCGTC GATGTCGCAC GCCGGATCAC GAGCTGGAAC CCGGCCGCGC GGCGCCTCTT CGGCATCGAC GCGGCGGCGG CGATCGGGCA CGACGTCACG ACGCTGATCG CGCCGCGCTG GCTGCGGTTG CATCCCGTTC CCGCATCGTT CGCGGACGCG GGCGCGCCGG CCGGCCCGCT CGACATCCTG TGCCTGCGCC GCGACGGCAG CCGTTTTCGC GCGACCTTCA CGGCGTCCCC GATCGTCGAC GCGCAAGGCA ATTGCACCGG CCTGTCGATG ACGCTGCGCG AGGCGCGCGA ACGCCGCCGC TGCGAGCAGC GCGATCTGCG CATGTTGCGC GGCGCGCGCG ACGCGCGCGT GCAGGCCGAC GAGTCGAACC GGATGAAGGA CGAGCTGCTG GCTACCGTAT CGCATGAACT GCGCACCCCG TTGAACGTGA TCTACGGATG GGTCGAGGTG CTGCGCAGCG GCGAGGGGCA GGGCTTCGCG CATCAGGCGA TCGACGCGAT CGATCGCAGC GCGCGATCGC TGTCGCGGAT GGTCGGTGAC CTGCTCGACG CGTCATCGCT CGCGACGGGC CGGGTGCGGC TCGAACGCAC GCCGGTGGAC CTCGTGCGGA TCGTGCAGGA GTCCGTGCGC GAAATCGGCG AGACCGCGGA GGCGAACGGC CTCGATTTGT CGACCGAGTG CGCGATGCCC AGCTGCGTGA TCGCCGCGGA CGCCGAGCGC CTGCGCCAGT TGCTGTCGAA CCTGTTGTCG AATGCGATCA AGTTCACGCC GCGGGGCGGA CGCATCAAGG TGTCGTTGAA TCCGGCCGGC GCGCGCGTGC GGCTATCGGT CGCCGATACG GGGCAAGGTA TTTCCGCGGA ACGCCTGCCG CACCTGTTCG ACACGTTCAG CCGGCCGGAA GGCGCGCCCG CGTTGCCGAA ACGCGGCTTA GGACTCGGCC TGTCGATCGT GCGCAACATC GCGCGGCTGC ACGGCGGCGA AGTCGCGGCG GCGAGCGAAG GCGCCGGCCG CGGTACGACC GTGACCGTCA TGCTGCCGGC GGACCTGGGT GCCGACGATC CGACCGGCCA CCCGGTACGG CCGAGCGGGG CGTCGACGGC GGTCGCGCTC GACGGCCGGC GCGTGCTGGT GGTCGACGAC GACGCGACGT CGCGCGCCAG CCTCGCGGCC GCGCTCGAAA CGTTGGGCGC CGAGGTGTCG ACCGCGCAAT CGGGACACGA CGCGCTCGAC GTGGTCGCGC AGCAGCACCC GAGCGTCGTG CTGTCCGATC TCGCGATGCC GGACGGCGAC GGCTTCTGGC TGCTCGACCA CATTCGCGAT TTGCCGGACG GCGGCGGGCG CCTGCCCGTC GTCGCGGTGA CCGCGCATGC GGGCACGGCG GACCGCAGCC GCGTGATGGC CGCCGGCTTC GACGCGTATC TGTGCAAGCC GGTCGACGTT CCGACGCTGG CCAGCGTGAT CGTCGACGTA TCGCCCGCCG ACGCGACGGG CGGCACCGGG CGGCGCCACT GA
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Protein sequence | MRTFTRELFR QGIWVVLAVG VAAVLQAWAI HVIGMHEPFA PLPFYAGVAA AAWLTSFAGG VAASAVSLAV IGGLWWRNMP LPDLLSQAGA FVAISFVECV LVMAVKPLLA NDRLRGAEDA EEGNARTPRR EPEPGSLARS VDDTVLRRVV DASPDAIVGV DVARRITSWN PAARRLFGID AAAAIGHDVT TLIAPRWLRL HPVPASFADA GAPAGPLDIL CLRRDGSRFR ATFTASPIVD AQGNCTGLSM TLREARERRR CEQRDLRMLR GARDARVQAD ESNRMKDELL ATVSHELRTP LNVIYGWVEV LRSGEGQGFA HQAIDAIDRS ARSLSRMVGD LLDASSLATG RVRLERTPVD LVRIVQESVR EIGETAEANG LDLSTECAMP SCVIAADAER LRQLLSNLLS NAIKFTPRGG RIKVSLNPAG ARVRLSVADT GQGISAERLP HLFDTFSRPE GAPALPKRGL GLGLSIVRNI ARLHGGEVAA ASEGAGRGTT VTVMLPADLG ADDPTGHPVR PSGASTAVAL DGRRVLVVDD DATSRASLAA ALETLGAEVS TAQSGHDALD VVAQQHPSVV LSDLAMPDGD GFWLLDHIRD LPDGGGRLPV VAVTAHAGTA DRSRVMAAGF DAYLCKPVDV PTLASVIVDV SPADATGGTG RRH
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