Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2844 |
Symbol | |
ID | 6089519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3131494 |
End bp | 3134367 |
Gene Length | 2874 bp |
Protein Length | 957 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641597915 |
Product | hybrid sensory kinase in two-component regulatory system with RcsB and YojN |
Protein accession | YP_001721573 |
Protein GI | 170025068 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.436473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTTTC ATCATGGTAT CCGATTGAAA TATCTCTCTT CATTCCGTAC GACACTAAAA ATATCCCGCT ACTTGTTCCG GGTATTGGCC GTTATGTTAT GGTCGCTTGG CGCATTATTG ACCACTTTTT ATATCCTGAA TGTACTTAAC GAAAAAAAAG CCGATATTCG TCAGGAATAT AACAACAACT TTGGTTTAGC GCAGAACTAC ATCCGGCATT CCGCTGAAAT TATACGCGAT ATCAAATATA TGGCGGAAAA TCGGCTAGAT AAAAACGCCA GTGACACAGA TGCCACTAGT GGCATGGTTA TGAATAAAAA GGCGGTACCA CAATATTACC CGCTTAACTC AGATTCAGGT TGCACGACGG CTAGCACGTC TAATCAAGCG TCAGTGAATA CTCTCAGTAA CCTTATTTGG TACTGGAAGG AGAACTTTAC TGCCGCTTAT GATCTCAATC GTGTCTTTTT TATTGGCACG GATACGTTGT GTATGGTGGA TTTTGACATC CGTAATGCTC CATCGCTGCA AGAAAACCTG CTTAAGTCGC TGTATGAGCA TACCTTAAAG TACCGTGATA CCAAGAATCA GGATAAAGAC AGCAATATTT ACTGGGTGGT ACCTGGTGCT CGTCCCGATA TTGGCGTCTT GTATGTTCTA AGCCCCGTTT ATCTAGGTAA TAGATTAGAG GCTATGATTG GCTTTGAGCA GAGTGTCCGC TTGGAGGATT TTATTTCTTC CCGAACACTG CCTATCAGAG TGACCTTATT AAATCAGGAT AATGAACCCG TGTTACAGAT GGCATCAGGT GATCGTTATC CGGCTATACT GGATGATTAT CCTGATTCAC CATCTTACTT TGGTTATGCT GATGATTATA AAGATCTTAT TCTAAAGAAA ACTTTACCAC CATCCCCCCT CAGTATTGCT TATTCATTAC CCGTCAAAAC GATAATAGAA GCATTCAAAT TATTGATTTT CAATGCGTTA CTTCTTAATG TGCTCTCTGC CGTAGTGATT TTTACATTGG CTTGGCTATT TGAGCGAAAA ATGTTTCATC CGGCTGAAGA TAATGCGCTG AGGCTTGAGG AGCACGAGCA ATTCAACCGC AAAATTGTGG CCTCGGCTCC TGTTGGGATA TCCATTTTGC GTATCAGTGA TGGTACTAAC ATCCTGAGTA ATGAATTGGC ACATAATTAT ATTAGTTTAC TGACTAATGA AGATCGGGAA CGTATTACGC GCATTATTTG TGAGCGTCAG GCTAACTTTG TCGATGTAAT GACCAGCAAC AACAATAATC TGCAAATTAG CTTTGTTCAT TCACGTTATA GAAATGAAGA TGTGGCGATT TGTGTGTTGG TTGATGTTAG TGCTCGGGTC AAAATGGAGG AATCGCTACA AGAAATGGCC ACGGCGGCAG AGCAAGCCAG TCAATCAAAA TCCATGTTTC TGGCTACCGT TAGTCATGAA TTGCGCACAC CGCTGTATGG CATTATCGGT AACCTCGATT TATTGCAAAC GAAAGAATTA CCGCAGGGAG TCGATCGGCT GGTAACGGCA ATGAATAATT CGTCGGGGTT ATTATTGAAA ATTATCAGTG ACATACTCGA TTTTTCTAAA ATAGAGTCTG AACAGCTGAA AATCGAGCCA AGCGAGTTTT CTACTGTGGA AGTGATTACC CATATCACGG CTAACTATTT GCCATTGGTC GTCAAAAAAC GGTTAGGACT GTATTGTTTT ATTGAACCGG ATGTCCCACG GCTCATAGAA GGTGACCCGG TTCGCCTACA ACAGGTGATT TCTAATCTCC TGAATAATGC CATTAAATTT ACCGATACAG GCTGCATCAT TTTGCAGGTA CGCGTGCGTG ATTGCTATCT GGAATTTCGG GTGCGGGATA CCGGTGTGGG TATTGATTCA CGTGAAATTA ATCAACTATT TGATCCTTTC TTCCAAGTGG GTACCGGTGT CCAACGCCAT TTTCAGGGAA CCGGATTAGG GCTGGCTATT TGTGAGAAGT TAGTCAACCT AATGGATGGC GATGTCGAAG TCATATCTGA ATTGGGGATG GGGAGTATTT TTGCTATCCG TATTCCCTTG TATCATCACC AAAATACCGT TCTGTCCGCC AATGATCGCT GGCAAGGAAA AGTGCTGTGG TTAGATATTC GCAATGCACG CCTGGAGAGC TATTTACTCG ATCTACTTGG CTACTTTGGT GCGACAATTC GGCGTTACTG TGGTGAGCAG ACTCAGCCGG AAGATGTGCT GATTTGCGAT TATCCGTCAC AACTCAGCCC CCCTTTACTG GCATGGATCC AACTCTCCAT TGAACATATT GGTTTACCAC AAGAGACGCG CCCTGCTTAC TGGTCACTGA GTACTTCAAC TTTACTGGAG ATAGTCCCCT TGCTGGACTG GATACTGCGG GGCCAGCAGC CGGTTGATAA TTCATCGTTA CAGTTACATG CACCGAAAAC GAATCAAGAT AATAATGCCG ATCTGCAAAT TCTGGTTGTG GATGACCATC CGATTAACCG CCGTTTACTG GCAGATCAGC TCACCACTTT GGGTTATCGA GTCATTACGG CTAATGATGG CTTGGATGCA TTGGTGGCGT TAAATACTAA TACCGTGGAT ATGGTATTGA CCGATGTGAA CATGCCAAAT ATGGATGGTT ACCGTTTAAC TGAGCGTTTG CGGCAGTTGA ATCACAATTT CCCGATTATT GGTGTAACCG CGAATGCTTT GGCTGAGGGA AAACAACGTT GCATTGAGGC GGGGATGGAT AATTGCCTGT CGAAGCCTGT GACGCTGGAT ACTCTGCGCC AGATGCTGCT TTACTACAGT GACCAAGTAC GGCGATCACG TTAG
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Protein sequence | MLFHHGIRLK YLSSFRTTLK ISRYLFRVLA VMLWSLGALL TTFYILNVLN EKKADIRQEY NNNFGLAQNY IRHSAEIIRD IKYMAENRLD KNASDTDATS GMVMNKKAVP QYYPLNSDSG CTTASTSNQA SVNTLSNLIW YWKENFTAAY DLNRVFFIGT DTLCMVDFDI RNAPSLQENL LKSLYEHTLK YRDTKNQDKD SNIYWVVPGA RPDIGVLYVL SPVYLGNRLE AMIGFEQSVR LEDFISSRTL PIRVTLLNQD NEPVLQMASG DRYPAILDDY PDSPSYFGYA DDYKDLILKK TLPPSPLSIA YSLPVKTIIE AFKLLIFNAL LLNVLSAVVI FTLAWLFERK MFHPAEDNAL RLEEHEQFNR KIVASAPVGI SILRISDGTN ILSNELAHNY ISLLTNEDRE RITRIICERQ ANFVDVMTSN NNNLQISFVH SRYRNEDVAI CVLVDVSARV KMEESLQEMA TAAEQASQSK SMFLATVSHE LRTPLYGIIG NLDLLQTKEL PQGVDRLVTA MNNSSGLLLK IISDILDFSK IESEQLKIEP SEFSTVEVIT HITANYLPLV VKKRLGLYCF IEPDVPRLIE GDPVRLQQVI SNLLNNAIKF TDTGCIILQV RVRDCYLEFR VRDTGVGIDS REINQLFDPF FQVGTGVQRH FQGTGLGLAI CEKLVNLMDG DVEVISELGM GSIFAIRIPL YHHQNTVLSA NDRWQGKVLW LDIRNARLES YLLDLLGYFG ATIRRYCGEQ TQPEDVLICD YPSQLSPPLL AWIQLSIEHI GLPQETRPAY WSLSTSTLLE IVPLLDWILR GQQPVDNSSL QLHAPKTNQD NNADLQILVV DDHPINRRLL ADQLTTLGYR VITANDGLDA LVALNTNTVD MVLTDVNMPN MDGYRLTERL RQLNHNFPII GVTANALAEG KQRCIEAGMD NCLSKPVTLD TLRQMLLYYS DQVRRSR
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