| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6888 |
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| Symbol | |
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| ID | 8549312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 9430394 |
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| End bp | 9433021 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646391552 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_003271244 |
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| Protein GI | 262200035 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.3668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAAGC AGAGTTTGCT CCTGGTCGAT GGAGACGCCC GCAGCCTGCG AGTGCTGGAG
GTGTCGCTGA AGAAGGCTGG TTTCAACGTA ACCACAGCCG TCAACGGTGC CGACGCGCTC
GACAAGGTCG AGATGGCGGC GCCCGATCTT ATCATCTCCG ATACCGAACT ACCGGAGATG
GACGGATTCA CCTTTTGTAA GCAGCTCAAG GCGGATCCGG ATTGGGCCGA GATTCCGTTT
ATCTTCCTCA CCGACCAGCT CTCCATCGAG CGCAAGATCC AGGGGCTCGA GCTCGGCGTC
GAGGACTACC TCACCAAGCC GATCTACATC AAAGAGATCA TCACGCGGGT CCGCCTGCTG
CTGCAAAAGC ACCAGCGCGC GCGCATCGAG GCCAAGCGCG ACCAGCGCAC GCGCTTCTCG
GGCCGCCTCA CCGATATGGG CGCGGTCGAT CTCATCCAGA CCATCGAGGT GAGCCGCAAG
TCCGGTCTCA TCCACTTCCA CGCCGACCAA GCGCGCCACG CCGAGCTGTA CTTCCGCGAC
GGCCGCGTCA TCGACGCCGA AGCCGGCGCG CTGCAGGGCG AAGACGCGGT GTACCGACTG
CTCACCTGGA GCGATGGCGA GTTCGAGGTG GTGTTCCGCA ACGTCCGGCG CAAGGACGTC
ATCGCCATCT CCTCGCAGGC GCTGCTCATG GAGGGAATGC GCCGCCTCGA CGAGTGGGGC
CGACTGCTCG AGCAGTTGCC GCCGCTGGAC TCGCGCTTCG AAGTCGACGC CGGCGAGCTG
GCCGAGCGCC TCAGCGAGCT GCCCGACGAG ACCAACGCGG TGCTCAAGCT CTTCGACGGC
AAGCGCTCGC TGATGGAGGT TATCGATACC AGCGTGTACG GCGACCTCGA GTGCCTGGAG
ATCGTCTCGC GCCTGTATTT CGAGGGCCTG GTCATCGAAG TCGACGAGAT GTCCGAATTC
CCGGCGCACA ATTCGGGCGC GGTGCCCGCG ATGGGCGCGC GCAGCGATTC GAGCCGCGTG
GAACAGCGCT CGGGGCCGGT GCGTATGGCA CCGAGCGCCG AGGGCCGCGA GGCGCAGCCG
CTCGAGCACG TACTCTCGGC CGAAGACCTG GCGCTAACGG ATGTGGATGT CGCGCCGTCG
CCGAGCAATC GTTTGATCGA TGCTGCGATC GGGGCTGCCG GGCCTGTGCT GCACGATATC
CGCGAGTTCG GCGACGAAGG GCCGCTGACG CCCAGCGAGG TGCGGGCCGA GTTCTCGGGC
GTGGCCGTGG ACGAGATCGA GGGCGATACG CCCATCCCGG CGCCGCAGTT GCCGATCGAT
AGCGGCGAGG TCGAGCACTC GGCGCGGCGT GTGGTGTCGT CGAAGGGCGC CGAGGTGGCG
AGCGCGTCGG GCGAGGTGGC GGTGGTGAGT TCGGCCGCGG TCAACGCGGT ACCAGCGCGC
GAGCTGATCA CCATCGTGCC CACGCGCGAC GACTCCGAGG AGGCCGAGGA CGATGACGCC
GGCCGCGTGG GTCGCGTGAC GCTCTCGCCC GACGATTCGG CGACCGTGGG CGCCGCGATC
GAGGCCGCGC TCGAAGATGA CGTCAGCACG GTGCATCGCT TGCCCGCTGG CGCCGCGGCT
GCGGGCTTCG GGGACGCCGA CGACGACACC GACGAGGAGA CGGCGCGCGC GATCGAGAAG
CTGGCGCGCT CGGCCGGCCT CGCAACTAGA TCCTCGGTGT CCTCGAAGTC CGAGGCGAAG
CCGGGCGGCA ATGGCCCAGG CAAGCAGCGC GACAGCGCGG CGCGAACGTC ACGCGAGGAT
CGCGCGGCTG CTCCGAAAGC CGTGCCCGCC ATGCAGGCGC CGCAGCGCAC GACGCGGGTG
CGCGCGCGCT CGAGCAGCCT GGGTATCTAT ATGGTGCTCG GTGCCGCGGT GCTGCTGGTC
CTGGCCTTCG TGGTCGGGCG CAGCAGCCGC GACTCGAGCG CGGCCCAAGA GGGCTTGGCC
GATGCGGCCC CCGCGCAGCA GCTACCGGCC GGCAATGACA AGCTCGCACC GACGGAACCG
GGGCCGACGC CGACGGAGAC GAAGCCGGAA CCGGAGCCTG CGCCGACGGA GACAAAACCG
GGACCGACAG AGACGGAGCC GGCGCCGACA GAGACGGAGC CGACGAAGCC TGCGCCGACG
GAGATGAAGC CGGCGCCGGC GGAGACGAAA CCTGCGCCGA CGGAGACGAA ACCTGCGCCG
ACGAAGCCGG AACCGACGAA ACCGGCGCCG AGCCAAGGCG GTGATACGCC CCCGGCCGAG
ACGCCGCAGA CGCTGATCGC GCAGGCGCGC GCGGCGCAGC GGGCGGGCAA TCTCGATGAG
GCCCTGGCCC AGGTCGATCG CGCGCTGGCG CTGCGGCGCT CGGGCGCCGC GCTCACGCTC
AAGGCCGATG TGCTGCTGTC GCTCAATCGC CAGGGCGAGG CCGCCGAGGC GGCCGCGGCC
GCGGTGCGCA GCAGCCCGAA CAGCGCGGCA GCGTGGCTGA CCAAGGGCAT GGTCCACCTG
GCGCGCCAGG AAAACCCGGC CGCCAAGGCC GCGCTCGCGC GCTATCTCGA GCTGGCGCCG
AGCGGCCGAC GCGCCGATGA CGTGCGCATG ATCCTCGAGA CCTTGTAG
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| Protein sequence | MAKQSLLLVD GDARSLRVLE VSLKKAGFNV TTAVNGADAL DKVEMAAPDL IISDTELPEM
DGFTFCKQLK ADPDWAEIPF IFLTDQLSIE RKIQGLELGV EDYLTKPIYI KEIITRVRLL
LQKHQRARIE AKRDQRTRFS GRLTDMGAVD LIQTIEVSRK SGLIHFHADQ ARHAELYFRD
GRVIDAEAGA LQGEDAVYRL LTWSDGEFEV VFRNVRRKDV IAISSQALLM EGMRRLDEWG
RLLEQLPPLD SRFEVDAGEL AERLSELPDE TNAVLKLFDG KRSLMEVIDT SVYGDLECLE
IVSRLYFEGL VIEVDEMSEF PAHNSGAVPA MGARSDSSRV EQRSGPVRMA PSAEGREAQP
LEHVLSAEDL ALTDVDVAPS PSNRLIDAAI GAAGPVLHDI REFGDEGPLT PSEVRAEFSG
VAVDEIEGDT PIPAPQLPID SGEVEHSARR VVSSKGAEVA SASGEVAVVS SAAVNAVPAR
ELITIVPTRD DSEEAEDDDA GRVGRVTLSP DDSATVGAAI EAALEDDVST VHRLPAGAAA
AGFGDADDDT DEETARAIEK LARSAGLATR SSVSSKSEAK PGGNGPGKQR DSAARTSRED
RAAAPKAVPA MQAPQRTTRV RARSSSLGIY MVLGAAVLLV LAFVVGRSSR DSSAAQEGLA
DAAPAQQLPA GNDKLAPTEP GPTPTETKPE PEPAPTETKP GPTETEPAPT ETEPTKPAPT
EMKPAPAETK PAPTETKPAP TKPEPTKPAP SQGGDTPPAE TPQTLIAQAR AAQRAGNLDE
ALAQVDRALA LRRSGAALTL KADVLLSLNR QGEAAEAAAA AVRSSPNSAA AWLTKGMVHL
ARQENPAAKA ALARYLELAP SGRRADDVRM ILETL
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