Gene YpsIP31758_2765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_2765 
SymbolrcsC 
ID5388178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3119611 
End bp3122460 
Gene Length2850 bp 
Protein Length949 aa 
Translation table11 
GC content44% 
IMG OID640865758 
Producthybrid sensory kinase in two-component regulatory system with RcsB and YojN 
Protein accessionYP_001401729 
Protein GI153948861 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.266073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAATATC TCTCTTCATT CCGTACGACA CTAAAAATAT CCCGCTACTT GTTCCGGGTA 
TTGGCCGTTA TGTTATGGTC GCTTGGCGCA TTATTGACCA CTTTTTATAT CCTGAATGTA
CTTAACGAAA AAAAAGCCGA TATTCGTCAG GAATATAACA ACAACTTTGG TTTAGCGCAG
AACTACATCC GGCATTCCGC TGAAATTATA CGCGATATCA AATATATGGC GGAAAATCGG
CTAGATAAAA ACGCCAGTGA CACAGATGCC ACTAGTGGCA TGGTTATGAA TAAAAAGGCG
GTACCACAAT ATTACCCGCT TAACTCAGAT TCAGGTTGCA CGACGGCTAG CACGTCTAAT
CAAGCGTCAG TGAATACTCT CAGTAACCTT ATTTGGTACT GGAAGGAGAA CTTTACTGCC
GCTTATGATC TCAATCGTGT CTTTTTTATT GGCACGGATA CGTTGTGTAT GGTGGATTTT
GACATCCGTA ATGCTCCATC GCTGCAAGAA AACCTGCTTA AGTCGCTGTA TGAGCATACC
TTAAAGTACC GTGATACCAA GAATCAGGAT AAAGACAGCA ATATTTACTG GGTGGTACCT
GGTGCTCGTC CCGATATTGG CGTCTTGTAT GTTCTAAGCC CCGTTTATCT AGGTAATAGA
TTAGAGGCTA TGATTGGCTT TGAGCAGAGT GTCCGCTTGG AGGATTTTAT TTCTTCCCGA
ACACTGCCTA TCAGAGTGAC CTTATTAAAT CAGGATAATG AACCCGTGTT ACAGATGGCA
TCAGGTGATC GTTATCCGGC TATACTGGAT GATTATCCTG ATTCACCATC TTACTTTGGT
TATGCTGATG ATTATAAAGA TCTTATTCTA AAGAAAACTT TACCACCATC CCCCCTCAGT
ATTGCTTATT CATTACCCGT CAAAACGATA ATAGAAGCAT TCAAATTATT GATTTTCAAT
GCGTTACTTC TTAATGTGCT CTCTGCCGTA GTGATTTTTA CATTGGCTTG GCTATTTGAG
CGAAAAATGT TTCATCCGGC TGAAGATAAT GCGCTGAGGC TTGAGGAGCA CGAGCAATTC
AACCGCAAAA TTGTGGCCTC GGCTCCTGTT GGGATATCCA TTTTGCGTAT CAGTGATGGT
ACTAACATCC TGAGTAATGA ATTGGCACAT AATTATATTA GTTTACTGAC TAATGAAGAT
CGGGAACGTA TTACGCGCAT TATTTGTGAG CGTCAGGCTA ACTTTGTCGA TGTAATGACC
AGCAACAACA ATAATCTGCA AATTAGCTTT GTTCATTCAC GTTATAGAAA TGAAGATGTG
GCGATTTGTG TGTTGGTTGA TGTCAGTGCT CGGGTCAAAA TGGAGGAATC GCTACAAGAA
ATGGCCACGG CGGCAGAGCA AGCCAGTCAA TCAAAATCCA TGTTTCTGGC TACCGTTAGT
CATGAATTGC GCACACCGCT GTATGGCATT ATCGGTAACC TCGATTTATT GCAAACGAAA
GAATTACCGC AGGGAGTCGA TCGGCTGGTA ACGGCAATGA ATAATTCGTC GGGGTTATTA
TTGAAAATAA TCAGTGACAT ACTCGATTTT TCTAAAATAG AGTCTGAACA GCTGAAAATC
GAGCCAAGCG AGTTTTCTAC TGTGGAAGTG ATTACCCATA TCACGGCTAA CTATTTGCCA
TTGGTCGTCA AAAAACGGTT AGGACTGTAT TGTTTTATTG AACCGGATGT CCCACGGCTC
ATAGAAGGTG ACCCGGTTCG CCTACAACAG GTGATTTCTA ATCTCCTGAA TAATGCCATT
AAATTTACCG ATACAGGCTG CATCATTTTG CAGGTACGCG TGCGTGATTG CTATCTGGAG
TTTCGGGTGC GGGATACCGG TGTGGGTATT GATTCACGTG AAATTAATCA ACTATTTGAT
CCTTTCTTCC AAGTGGGTAC CGGTGTCCAA CGCCATTTTC AGGGAACCGG ATTAGGGCTG
GCTATTTGTG AGAAGTTAGT CAACCTAATG GATGGCGATG TCGAAGTCAT ATCTGAATTG
GGGATGGGGA GTATTTTTGC TATCCGTATT CCCTTGTATC ATCACCAAAA TACCGTCCTG
TCCGCCAATG ATCGCTGGCA AGGAAAAGTG CTGTGGTTAG ATATTCGCAA TGCACGCCTG
GAGAGCTATT TACTCGATCT ACTTGGCTAC TTTGGTGCGA CAATTCGGCG TTACTGTGGT
GAGCAGACTC AGCCGGAAGA TGTGCTGATT TGCGATTATC CGTCACAACT CAGCCCCCCT
TTACTGGCAT GGATCCAACT CTCCATTGAA CATATTGGTT TACCACAAGA GACGCGCCCT
GCTTACTGGT CACTGAGTAC CTCAACTTTA CTGGAGATAG TCCCCTTGCT GGACTGGATA
CTGCGGGGCC AGCAGCCGGT TGATAATTCA TCGTTACAGT TACATGCACC GAAAACGAAT
CAAGATAATA ATGCCGATCT GCAAATTCTG GTTGTGGATG ACCATCCGAT TAACCGCCGT
TTACTGGCAG ATCAGCTCAC CACTTTGGGT TATCGAGTCA TTACGGCTAA TGATGGCTTG
GATGCATTGG TGGCGTTAAA TACTAATACC GTGGATATGG TATTGACCGA TGTGAACATG
CCAAATATGG ATGGTTACCG TTTAACTGAG CGTTTGCGGC AGTTGAATCA CAATTTCCCG
ATTATTGGTG TAACCGCGAA TGCTTTGGCT GAGGGAAAAC AACGTTGCAT TGAGGCGGGG
ATGGATAATT GCCTGTCGAA GCCTGTGACG CTGGATACTC TGCGCCAGAT GCTGCTTTAC
TACAGTGACC AAGTACGGCG ATCACGTTAG
 
Protein sequence
MKYLSSFRTT LKISRYLFRV LAVMLWSLGA LLTTFYILNV LNEKKADIRQ EYNNNFGLAQ 
NYIRHSAEII RDIKYMAENR LDKNASDTDA TSGMVMNKKA VPQYYPLNSD SGCTTASTSN
QASVNTLSNL IWYWKENFTA AYDLNRVFFI GTDTLCMVDF DIRNAPSLQE NLLKSLYEHT
LKYRDTKNQD KDSNIYWVVP GARPDIGVLY VLSPVYLGNR LEAMIGFEQS VRLEDFISSR
TLPIRVTLLN QDNEPVLQMA SGDRYPAILD DYPDSPSYFG YADDYKDLIL KKTLPPSPLS
IAYSLPVKTI IEAFKLLIFN ALLLNVLSAV VIFTLAWLFE RKMFHPAEDN ALRLEEHEQF
NRKIVASAPV GISILRISDG TNILSNELAH NYISLLTNED RERITRIICE RQANFVDVMT
SNNNNLQISF VHSRYRNEDV AICVLVDVSA RVKMEESLQE MATAAEQASQ SKSMFLATVS
HELRTPLYGI IGNLDLLQTK ELPQGVDRLV TAMNNSSGLL LKIISDILDF SKIESEQLKI
EPSEFSTVEV ITHITANYLP LVVKKRLGLY CFIEPDVPRL IEGDPVRLQQ VISNLLNNAI
KFTDTGCIIL QVRVRDCYLE FRVRDTGVGI DSREINQLFD PFFQVGTGVQ RHFQGTGLGL
AICEKLVNLM DGDVEVISEL GMGSIFAIRI PLYHHQNTVL SANDRWQGKV LWLDIRNARL
ESYLLDLLGY FGATIRRYCG EQTQPEDVLI CDYPSQLSPP LLAWIQLSIE HIGLPQETRP
AYWSLSTSTL LEIVPLLDWI LRGQQPVDNS SLQLHAPKTN QDNNADLQIL VVDDHPINRR
LLADQLTTLG YRVITANDGL DALVALNTNT VDMVLTDVNM PNMDGYRLTE RLRQLNHNFP
IIGVTANALA EGKQRCIEAG MDNCLSKPVT LDTLRQMLLY YSDQVRRSR