Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5761 |
Symbol | |
ID | 8229377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6918705 |
End bp | 6922319 |
Gene Length | 3615 bp |
Protein Length | 1204 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644933606 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_003090114 |
Protein GI | 255039493 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.122146 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACTGA TTTTATCCCA AACCGACTGG CAGACTATTC ACCACACACT TCAACATTTA AACCTGATCG GAATTACTTT TTCGCCCGAT TTTGTGATCC GCAGCGTGAG CCCGCATGCG CTCATGAAAA CCGGCTGGCA CGAGTCGGAG CTGGTGGGTT TCAGTATATT CGATAAGCTG ATCCCGAGGG ATGAGGAACA CGAGGTTCGG CAGATGCTCG AAGAGGGTAT ACAGGGCAAG CGGAAGCTGG AACAGCGGGA GGTGCCATTC CTGGCACAAA AGGGGACATT GCGCACATTC TCGATCAACT CCGTGCTGAT TCATCAGCAA AATGGTGACG TTGAATGCAT TACCCTCGTA GGCGACGATA TTACACGTCG CCGGCGAATG GAATCCGCCA TTGCCAAGTC GAATTCGCAG TTGCAGGACC TGGTGGATAA TACGAGCGAT CTCATCCAGC TCGTGGCGAT CGACGGCAAG TTCATTTTCG TTAACAAAGC CTGGCGCGAG GTGCTGGGCT ACGGGCTCGA CGAAATCGCG TCCATGCGGA TGGAGGATAT TCTGCATCCC CAGCACAAGG AGGAAGCGCT CGAACAGCTG AAAAAGATCG AACAAGGTAT CGCCAATCCA AGCTTCGAGG CGGTTTTTAT GAACCGCGAC GGGAAGAAAG TATTCGTGGC CGGAAGTGTA AACTGCCGTT TCGACAATGG CAAACCGACC GCATTCCGGT GTATTTTAAA TGATTTTACA GAAAAGATAA GGGCTGAGAA GGCGCAAAAC CTGTATTACA GCATTGCCAA CTGGACGGTC AACACGCAAA ATCTTGACGA ATTTTACCAC GGTATCCACG ATGAACTAGG TAAGATCATC GACGTGCGCA ACTTCTTCAT CGCGCTTTAC GACCCGAGCA AAAGCTACAT TTATTTCCCT TATTATGTGG ATCAATATTT CAAGGGAAAT GTGCGGTTTA CCAAAAGGAA ACTGGGCAAT GGCTTGACCG AATACGCAAT TGCGTCCAAT AAGCCGTTGT TTTTGTCGGA TACGGACATT GAAAAACTGG CCAAAACCAA CAGCCTTTAC CTCTACGGTG TTACGCCGAA AGTGCTTTTG TGCGTGCCCT TGCGTATTGG CGACCGGGTA ACGGGTATTA TCGGGGTTAA GTCTTATGAT GATCCGAATA TGTTCGATAC CCGCGACCTG GAATTGTTGG AATTTATTTC CGGACAGGTG GCTATGGCCA TCGCCAGGAA GCAAAGCGAA GAAGAATTGA GCAAATACCT GGCGCGCTTA AATGCGATTT TCGATAGCAG TTCGCATTTG ATATGGTCGG TGAATAAGTC GCTGCAACTG ACTTCATTCA ACAGAAACTA CGCGGATCTG ATTCATAATC AGCTTGGTGT GCGGCCGTCG CTGCAATCGA GCGCGGAGAA ATTCGGCTGG CGGATGGTGG GCAACAGCAA CCGCCGCACG CTCGAAACGA AGTACCGGCA GGCATTGCGC GGCGAACCGC AGTATTTCGA ATTTAAGATC GACCGCAAGG ATGCCGGCGA AATGTGGCTC GAATTTTACC TGAACCCCAT CCACTATGCC GACGGCGTGA TCGAAGAAGT GTCGGGTATT GCCCGTGACA TTACCCGGCG GAAAGAGGCC GAACTATCGC TGAGGCACAG TGAGGAGCTT TTCAGGGGTA TTTTTGAAAA CTTGCAGGAT ATTTATTGCC GGATCAACCG CCTTGGCGAG ATTACGATGA TCAGCCAGTC GGTGCTGAAA CGCCTGGGTT ATCTGCCGGA AGAAGTGATC GGTCACAAGA TTACCGAGTT TTTTGCGGAC AAAAAGCGCA TTCACTCTGC ATTGATACGG CTTCGGAAAA CCAAAAGTCT GCGGAATTTC GAGATCACGA TGTACCGCAA AGATGGTACG GAGCGCCAGT TTATGATCAA TATGCTGATG TTCACGAATG ACAAAGGCAA ACCAACCGAA GTGGCGGTTC TCGCCCGCGA CATTACTGAA CTGAAACGCA ATGAACTCGA ATTGCTGAAA GCCAAGGAGC ATGCGGAACG TTCCCTGAAG GTAAAAGAAG GTTTTTTGGC CAACATGAGC CACGAAATCC GCACGCCGAT GAACGGCGTG ATCGGGATGA TCGACCTGCT GGGCGAAACG CCGCTGAATA CGGAGCAAAA GGATTATGTA CTAACGATCA AACGGTCGTC GGAAACGCTG CTGAACATTC TGAACGACAT TCTTGACCTT TCGAAAATCG AGGCGGGAAA AATGGAGCTG CACGAAGCAC CGATTGCGGT GGAAGAGCTG CTGCTCAAAC TGGTGTCGCT TTTCGGGCAA ACGGCCAAAA GCAAGGGCAA TACACTGAGC TACCACGTCG GACCGGACAT TCCCAAATTC ATCATCGCCG ATCAAACGAG GTTGCTGCAA ATCATGTCCA ACCTCACGTC CAATGCATTG AAATTCACAG AGAATGGTTC TGTGAAGGTC TTTCTCACAT TGGTCAAAAA GGATGGTCTG TTCCACAAGA TCAAGGTAGA TGTGCAGGAT TCGGGGATTG GTATCAGCGC CACCGACAAG CAGATTCTGT TTACCTCATT TACACAGCTT GATAACTCAT CACGCAAATC ATTCGGCGGC ACCGGTCTCG GACTGGCCAT TTCGAAACAG CTTTGCGCAT TGATGAACGG CGAAATCGGT GTGGAATCGA CGCTGGGCGA GGGGAGCACG TTCTGGTTTA CATTTGAAAC AAAGGAAACT TCTATTGCCC AGGTAGGCAC CGTCACGCAG CTTGAAGATA CGCCTATCGA GGACGTGTTT ACCGATTACC ACCCGTCTAT CCTCCTCGTG GACGACAATG CCGTGAACCG GAAGGTAGCC AACGAGATCC TTAAAAAATC GGGCTGCGAG ACGGATATGG CGGAGAGTGG TTTCAAGGCG ATCGAAATGG TAGAAAAACG GTACCATTCC GATGCGAAAG GCTATGATAT CATCTTCATG GATATTCAAA TGCCTGATAT GGATGGGGTG GAAACGACCC AGGAGCTTAA AAAGCGCTTT TCGAAAGGAC TTCCACCGAT TGTTGCCATG ACGGCCTATT CGATGAAGGA GGACCGCGAT CGCTTTATGA GCCAGGGAAT GGACGATTAC ATTGCCAAGC CCATTCGGGC ACAAACGCTC GTTCAGAAGG TGAAAGACCT CATGGGCAAC ATCGAAGGCC GCAAACTTGA ACAGAAACAG AAGGAAATCG CGCAGGAGGC CATGTCGCCT GTGCTGGATA AGGAGATTAT CGACCAACTG GCGGGTATCG GCGGCGCCGA CCTCGTATGG TCGGTATTCG AGGATTTCGT TACGGAATCG GACGAATTGG TGGCGGGTGC ATTGGAGGCT TACAAAACCG GCGATATCAA AACGGTGAAA AGCAATTTGC ATACGCTCAA AGGCAGCGGC GGCACGGTAG GTGTGCATCA GGTTGCAGAA ATTGCGCGCG ATGCAGAGTG GCGGCTCAAA TCGGACGACA CGAGTACGCT TGCCGAAGCG CTCCCGCAGT TGGAGAAGGC ATATGAGCGA TTTTTGGCCA GCTACAAGGG TTTGCTGGGC GAATGGCTGA AATAA
|
Protein sequence | MELILSQTDW QTIHHTLQHL NLIGITFSPD FVIRSVSPHA LMKTGWHESE LVGFSIFDKL IPRDEEHEVR QMLEEGIQGK RKLEQREVPF LAQKGTLRTF SINSVLIHQQ NGDVECITLV GDDITRRRRM ESAIAKSNSQ LQDLVDNTSD LIQLVAIDGK FIFVNKAWRE VLGYGLDEIA SMRMEDILHP QHKEEALEQL KKIEQGIANP SFEAVFMNRD GKKVFVAGSV NCRFDNGKPT AFRCILNDFT EKIRAEKAQN LYYSIANWTV NTQNLDEFYH GIHDELGKII DVRNFFIALY DPSKSYIYFP YYVDQYFKGN VRFTKRKLGN GLTEYAIASN KPLFLSDTDI EKLAKTNSLY LYGVTPKVLL CVPLRIGDRV TGIIGVKSYD DPNMFDTRDL ELLEFISGQV AMAIARKQSE EELSKYLARL NAIFDSSSHL IWSVNKSLQL TSFNRNYADL IHNQLGVRPS LQSSAEKFGW RMVGNSNRRT LETKYRQALR GEPQYFEFKI DRKDAGEMWL EFYLNPIHYA DGVIEEVSGI ARDITRRKEA ELSLRHSEEL FRGIFENLQD IYCRINRLGE ITMISQSVLK RLGYLPEEVI GHKITEFFAD KKRIHSALIR LRKTKSLRNF EITMYRKDGT ERQFMINMLM FTNDKGKPTE VAVLARDITE LKRNELELLK AKEHAERSLK VKEGFLANMS HEIRTPMNGV IGMIDLLGET PLNTEQKDYV LTIKRSSETL LNILNDILDL SKIEAGKMEL HEAPIAVEEL LLKLVSLFGQ TAKSKGNTLS YHVGPDIPKF IIADQTRLLQ IMSNLTSNAL KFTENGSVKV FLTLVKKDGL FHKIKVDVQD SGIGISATDK QILFTSFTQL DNSSRKSFGG TGLGLAISKQ LCALMNGEIG VESTLGEGST FWFTFETKET SIAQVGTVTQ LEDTPIEDVF TDYHPSILLV DDNAVNRKVA NEILKKSGCE TDMAESGFKA IEMVEKRYHS DAKGYDIIFM DIQMPDMDGV ETTQELKKRF SKGLPPIVAM TAYSMKEDRD RFMSQGMDDY IAKPIRAQTL VQKVKDLMGN IEGRKLEQKQ KEIAQEAMSP VLDKEIIDQL AGIGGADLVW SVFEDFVTES DELVAGALEA YKTGDIKTVK SNLHTLKGSG GTVGVHQVAE IARDAEWRLK SDDTSTLAEA LPQLEKAYER FLASYKGLLG EWLK
|
| |