Gene GSU1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1671 
Symbol 
ID2687445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand- 
Start bp1831449 
End bp1832417 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content56% 
IMG OID637126352 
Productresponse regulator/GGDEF domain-containing protein 
Protein accessionNP_952722 
Protein GI39996771 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATG CCATTACGGA TGAAACACGC GCGCCGCGCT TCCCTTTTCC CATTCTCATC 
GTTGACGACA ACCGCCTGCT GCGCACCATG CTGGAAACCA GCTTGAAATC TGCCGGTTAC 
GATGTGGTAA TGGCGGAAAA CGGCAAAGAG GCCCTGGAAA TCTTCAACAA GGGGTACTAC 
CCTATCGTCA TGACGGACTG GGTAATGCCG GAAATGGATG GGCTCGAACT CTGCCGGGCC 
ATCCGCGCCG ACTGTTCCGG CCGTTATACC TACATTATCC TCCTCACCTC CCAGGACTCG 
AAGAACGATG TCATCGCAGG ACTTGAAGCG GGTGCAGACG AATATCTCGT CAAACCGGCC 
CACCAGGTTG AGCTGTTGAC CCGTCTTAAA ACCGCCAAGC GAATCCTCGA CCTGGAAAGC 
TCACTGAAAA AAAGCCTGGA AGAGATCGGC AACCTCTCCC GGATCGACAC GTTGACCGGC 
GTCTACAACC GCCGCTACCT GGATGAGCGC CTTTCCCCCG AAATCAAGCG AGCTTACCGC 
TATGAACGGG CACTGTCCCT GATTCTTGTC GGGATTAACG ACTTCAGCGG GATTACCTCT 
GCCCACGGAC ATTACGCGGG CGAGCTGGCT CTCAAGGGGT GCGCCGACGT TCTCGCCGAA 
TCGATCCGCA GGGACATCGA CTGGCTGGCA CGTTACGATG ACGACAGATT CGTGGTTGTT 
CTTCCTGAAA CAGACGCCTC GGGAGCCATG ATTCTCGCCA AGAGGCTCCG GATTCGGATT 
GCGTCGATGG CGCTGAAACT GTACGACAAA GAGATCAAGG TCAATGCAGC CTTCGGGGTA 
GCCGGTTTTA CCGCAACCCA GCAAAAAGAG GGAATGACGC CCCACATTCT GCTCGACAAA 
GCGGACCGCT CATTGCGGGA AGCCTTGGAA GAAGGGGGTG AAATGATCAA GGGAGTCCAG 
CTTCATTGA
 
Protein sequence
MTDAITDETR APRFPFPILI VDDNRLLRTM LETSLKSAGY DVVMAENGKE ALEIFNKGYY 
PIVMTDWVMP EMDGLELCRA IRADCSGRYT YIILLTSQDS KNDVIAGLEA GADEYLVKPA 
HQVELLTRLK TAKRILDLES SLKKSLEEIG NLSRIDTLTG VYNRRYLDER LSPEIKRAYR 
YERALSLILV GINDFSGITS AHGHYAGELA LKGCADVLAE SIRRDIDWLA RYDDDRFVVV 
LPETDASGAM ILAKRLRIRI ASMALKLYDK EIKVNAAFGV AGFTATQQKE GMTPHILLDK 
ADRSLREALE EGGEMIKGVQ LH