Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3018 |
Symbol | |
ID | 8116995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 3434445 |
End bp | 3437312 |
Gene Length | 2868 bp |
Protein Length | 955 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644853395 |
Product | hybrid sensory kinase in two-component regulatory system with RcsB and YojN |
Protein accession | YP_003005319 |
Protein GI | 251790598 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0433784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTGA AAGTTATTGC TTCTTTTCAG TCTACCCTCA AAATCTCCCG GTATATGTTC CGGGTGCTGG CGACTACGTT GTGGATTCTG GGCGCACTGA TTTCAGTTTT CTATGTCAAT AAGGAACTGA ATCAACGGGA ATCGCATTTA CGCCAAATTT TCTCGCTCAA TTTCGAACAG TCGCTGGGGT ATATTCGTCA TACTACGGAT GTCGCACGTG AACTGAGATA CATTGCCGCC AACCGATTTA GCGTTTCATC CCTATCCCGC GAACGTAAGT CTTCCACGCC AAAAACGCCG TTTTCCATTT ATCCGCTATC GCCCACGTTT AATTGTGGCG AACAATATGC GAAGACCCCG GCTTTGTTGC AGTCACTGAG CGGATTTTTT GAACAATGGC ATGATGATTT CTCATCGGTT TATGATCTGA ATCGGCTCTT TTTTGTCGAT AGCAGTCAGC AATGCATCGT CGATTTTAGT ATCCGTAATC AATCACTGGA TAGCGACAGC CTGCTGAAAA GCGTGCAAGA GCGGTTACAG AATCAGAATT CCAATCGGGT GGGAAATCGC CGCGAAGAGA GTCTGTTCTG GGTGGTGCCC GGTCCGACGC AGGAAGTAGG GTATTTGTAT GCGTTGACGC CGGTGTATGT GGATAACCAT CTGGTGACCA TGATGGGCAT TGAACAGACC ATCAGGCTGG ATGATTTTAT GTTGAATGGC GACCTGCCGT TCAGCGTCAG GTTGTTGGAT CAAAATGATC ACGTATTGCT GCAGCTCACC GATAATCAGT CTGGCGGCAA CAGCCCCACC CATTATCCCG ATTCGAACAA TTACTTCGGT TATAGCGACG GTTATGGAAC CCTGTTGATG AAAAAGGCGT TACCGCCTAC ATCAATGACC GTGGTCTATT CGTTGCCGCT GGAAGTGATC CTGATGTCGC TCAATACGCT GATCATCAAT ATTGCATTGT TGAACCTGGC GTTAGCTATC TGTTTGTTTT TATTGGCAAG ATTATTTGAG CGCAAGATCT TTCTGCCCGC GGAACGCAAC GCCTTCCAAC TGGAGGAGAA CGAGCAATTT AACCGCAAGA TCGTCGCCTC GGCACCGGTA GGGATTTGTA TTTTAAGGAT CAGCGACGGT ACCAATATTC TCAGTAACGA GCTGGCGCAT AACTACCTTA GCCTGCTGAC GTATGAAGAC CGGGTGCGCA TTGTTCGGAT TATTTGCGAA CAGCAGTCCA AATCGCTGGA TGTGGTGACC GGGCGTAATC ACCACCTGCA AATCAGTTTC GTGCATTCGC GCTATCGCAA TGAAAACGTC GCTATTTGCG TACTGCTTGA CGTCAGTGCC CGCGTTCGCA TGGAGGAGTC GCTGCAGGAG ATGGCTAACG CCGCTGAGCA GGCCAGCCAG TCTAAGTCGA TGTTTCTGGC AACCGTCAGT CATGAGTTGC GTACACCGCT GTATGGGATT ATCGGCAATC TGGACTTGCT GCAGACGAAA TCGCTGCCGT CAGATGCTAA TCGGCTGGTG ACCGCGATGC AAAATTCTTC GGCGCTGTTG CTGAAGATCA TCAGCGACAT TTTGGATTTC TCCAAGATCG AATCGGAACA GTTGAAGATC GAGCCCAGTG AGTTTGCACC GCGTGAAGTG ATAAACCATA TTTTAAACAA TTATTTACCG TTGGTGGTGA AAAAACGTCT CGAGTTGTAC TGCTATATCG ACCCTAACGT GCCCTCACGG TTAATGGGGG ATGCGGTGCG ATTACAGCAG GTATTGAGTA ATCTGCTCAG TAATGCCATT AAGTTTACCG ATACCGGCTG TATCGTGTTT CAGGTGGCGT GTAGCGACGA GGGCTACCTG GTATTTAAAG TGCGGGATAC CGGCGTCGGG ATTGATACCC GCTCGGTGAT GAAACTGTTT GACCCGTTCT TTCAGGCTGG AACCGGGGTT CAGCGCCATT TTCAAGGCAC CGGTCTGGGG CTGGCGATTT GTGAAAAGCT GGTCAGCCTG ATGGATGGCG ACATTACGAT TGAATCTGAG CCTGGGCTTG GCAGTGAATT CGGTATTCGT ATTCCGCTTT ATCGCGCTCA CTATCCCCAG ACATTGCAGT TGTCTGATTT ACAGGGAAAA ACGTGCTGGC TGCACATCCG TAATGCCTTG ATGGAACGTT ATCTGCTGGG CCTGCTCAGT GCCTGTGGTC TGGATGCACG GCGATACGAT GAAGGGCAGG CGGTAGGAAA CGACGACGTT ATGATTTTTG ATCATACGCC TGATGTTGAG CCAAAGGCAC GCGTCAGCGT GGAGATTTGC GCAACGCATG GTGGTGCGCC TCAGGAACAA CGAGCAGGAT ATTGGCTTTA CAGTACTGCC GTGCTGCATG AGTTGCCGAC GCTGCTGCAA CGTATTTATC GCGGTGAAGA TGCGTTGCCG GCCGTGGCGG CGTTTCAGCC TGCGGTGAGT TATAGCCGCA CCGAGAATGG CGATATTCAT CTGCTGGTGG TGGATGACCA CCCGATTAAC CGCCGTTTGC TGGCTGACCA GCTTGGGTCG CTGGGGTATC AGGTGATTAC CGCTAATGAT GGGCTTGATG CGCTGGATGT GCTGGCGAAA AATCCGGTGG ACATTGTGCT TACCGATGTC AACATGCCGA ATATGGACGG GTATCGTTTT ACTCAGCAAC TGCGGGAGAT GGGACAGACC TTGCCGGTGA TTGGCGTTAC GGCCAATGCA TTGGCGGAAG AGCGGCAACG TTGTTTGCAA GCCGGTATGG ATAATTGCTT GTCCAAGCCG GTAACGCTGG ATACATTGCA ACAATCACTG TCGTATTACA GCCATCTCGT CAGACAGGGG AAAACGGCTC AGTCGTAA
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Protein sequence | MPLKVIASFQ STLKISRYMF RVLATTLWIL GALISVFYVN KELNQRESHL RQIFSLNFEQ SLGYIRHTTD VARELRYIAA NRFSVSSLSR ERKSSTPKTP FSIYPLSPTF NCGEQYAKTP ALLQSLSGFF EQWHDDFSSV YDLNRLFFVD SSQQCIVDFS IRNQSLDSDS LLKSVQERLQ NQNSNRVGNR REESLFWVVP GPTQEVGYLY ALTPVYVDNH LVTMMGIEQT IRLDDFMLNG DLPFSVRLLD QNDHVLLQLT DNQSGGNSPT HYPDSNNYFG YSDGYGTLLM KKALPPTSMT VVYSLPLEVI LMSLNTLIIN IALLNLALAI CLFLLARLFE RKIFLPAERN AFQLEENEQF NRKIVASAPV GICILRISDG TNILSNELAH NYLSLLTYED RVRIVRIICE QQSKSLDVVT GRNHHLQISF VHSRYRNENV AICVLLDVSA RVRMEESLQE MANAAEQASQ SKSMFLATVS HELRTPLYGI IGNLDLLQTK SLPSDANRLV TAMQNSSALL LKIISDILDF SKIESEQLKI EPSEFAPREV INHILNNYLP LVVKKRLELY CYIDPNVPSR LMGDAVRLQQ VLSNLLSNAI KFTDTGCIVF QVACSDEGYL VFKVRDTGVG IDTRSVMKLF DPFFQAGTGV QRHFQGTGLG LAICEKLVSL MDGDITIESE PGLGSEFGIR IPLYRAHYPQ TLQLSDLQGK TCWLHIRNAL MERYLLGLLS ACGLDARRYD EGQAVGNDDV MIFDHTPDVE PKARVSVEIC ATHGGAPQEQ RAGYWLYSTA VLHELPTLLQ RIYRGEDALP AVAAFQPAVS YSRTENGDIH LLVVDDHPIN RRLLADQLGS LGYQVITAND GLDALDVLAK NPVDIVLTDV NMPNMDGYRF TQQLREMGQT LPVIGVTANA LAEERQRCLQ AGMDNCLSKP VTLDTLQQSL SYYSHLVRQG KTAQS
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