| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3018 |
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| Symbol | |
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| ID | 8116995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3434445 |
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| End bp | 3437312 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644853395 |
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| Product | hybrid sensory kinase in two-component regulatory system with RcsB and YojN |
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| Protein accession | YP_003005319 |
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| Protein GI | 251790598 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0433784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTGA AAGTTATTGC TTCTTTTCAG TCTACCCTCA AAATCTCCCG GTATATGTTC
CGGGTGCTGG CGACTACGTT GTGGATTCTG GGCGCACTGA TTTCAGTTTT CTATGTCAAT
AAGGAACTGA ATCAACGGGA ATCGCATTTA CGCCAAATTT TCTCGCTCAA TTTCGAACAG
TCGCTGGGGT ATATTCGTCA TACTACGGAT GTCGCACGTG AACTGAGATA CATTGCCGCC
AACCGATTTA GCGTTTCATC CCTATCCCGC GAACGTAAGT CTTCCACGCC AAAAACGCCG
TTTTCCATTT ATCCGCTATC GCCCACGTTT AATTGTGGCG AACAATATGC GAAGACCCCG
GCTTTGTTGC AGTCACTGAG CGGATTTTTT GAACAATGGC ATGATGATTT CTCATCGGTT
TATGATCTGA ATCGGCTCTT TTTTGTCGAT AGCAGTCAGC AATGCATCGT CGATTTTAGT
ATCCGTAATC AATCACTGGA TAGCGACAGC CTGCTGAAAA GCGTGCAAGA GCGGTTACAG
AATCAGAATT CCAATCGGGT GGGAAATCGC CGCGAAGAGA GTCTGTTCTG GGTGGTGCCC
GGTCCGACGC AGGAAGTAGG GTATTTGTAT GCGTTGACGC CGGTGTATGT GGATAACCAT
CTGGTGACCA TGATGGGCAT TGAACAGACC ATCAGGCTGG ATGATTTTAT GTTGAATGGC
GACCTGCCGT TCAGCGTCAG GTTGTTGGAT CAAAATGATC ACGTATTGCT GCAGCTCACC
GATAATCAGT CTGGCGGCAA CAGCCCCACC CATTATCCCG ATTCGAACAA TTACTTCGGT
TATAGCGACG GTTATGGAAC CCTGTTGATG AAAAAGGCGT TACCGCCTAC ATCAATGACC
GTGGTCTATT CGTTGCCGCT GGAAGTGATC CTGATGTCGC TCAATACGCT GATCATCAAT
ATTGCATTGT TGAACCTGGC GTTAGCTATC TGTTTGTTTT TATTGGCAAG ATTATTTGAG
CGCAAGATCT TTCTGCCCGC GGAACGCAAC GCCTTCCAAC TGGAGGAGAA CGAGCAATTT
AACCGCAAGA TCGTCGCCTC GGCACCGGTA GGGATTTGTA TTTTAAGGAT CAGCGACGGT
ACCAATATTC TCAGTAACGA GCTGGCGCAT AACTACCTTA GCCTGCTGAC GTATGAAGAC
CGGGTGCGCA TTGTTCGGAT TATTTGCGAA CAGCAGTCCA AATCGCTGGA TGTGGTGACC
GGGCGTAATC ACCACCTGCA AATCAGTTTC GTGCATTCGC GCTATCGCAA TGAAAACGTC
GCTATTTGCG TACTGCTTGA CGTCAGTGCC CGCGTTCGCA TGGAGGAGTC GCTGCAGGAG
ATGGCTAACG CCGCTGAGCA GGCCAGCCAG TCTAAGTCGA TGTTTCTGGC AACCGTCAGT
CATGAGTTGC GTACACCGCT GTATGGGATT ATCGGCAATC TGGACTTGCT GCAGACGAAA
TCGCTGCCGT CAGATGCTAA TCGGCTGGTG ACCGCGATGC AAAATTCTTC GGCGCTGTTG
CTGAAGATCA TCAGCGACAT TTTGGATTTC TCCAAGATCG AATCGGAACA GTTGAAGATC
GAGCCCAGTG AGTTTGCACC GCGTGAAGTG ATAAACCATA TTTTAAACAA TTATTTACCG
TTGGTGGTGA AAAAACGTCT CGAGTTGTAC TGCTATATCG ACCCTAACGT GCCCTCACGG
TTAATGGGGG ATGCGGTGCG ATTACAGCAG GTATTGAGTA ATCTGCTCAG TAATGCCATT
AAGTTTACCG ATACCGGCTG TATCGTGTTT CAGGTGGCGT GTAGCGACGA GGGCTACCTG
GTATTTAAAG TGCGGGATAC CGGCGTCGGG ATTGATACCC GCTCGGTGAT GAAACTGTTT
GACCCGTTCT TTCAGGCTGG AACCGGGGTT CAGCGCCATT TTCAAGGCAC CGGTCTGGGG
CTGGCGATTT GTGAAAAGCT GGTCAGCCTG ATGGATGGCG ACATTACGAT TGAATCTGAG
CCTGGGCTTG GCAGTGAATT CGGTATTCGT ATTCCGCTTT ATCGCGCTCA CTATCCCCAG
ACATTGCAGT TGTCTGATTT ACAGGGAAAA ACGTGCTGGC TGCACATCCG TAATGCCTTG
ATGGAACGTT ATCTGCTGGG CCTGCTCAGT GCCTGTGGTC TGGATGCACG GCGATACGAT
GAAGGGCAGG CGGTAGGAAA CGACGACGTT ATGATTTTTG ATCATACGCC TGATGTTGAG
CCAAAGGCAC GCGTCAGCGT GGAGATTTGC GCAACGCATG GTGGTGCGCC TCAGGAACAA
CGAGCAGGAT ATTGGCTTTA CAGTACTGCC GTGCTGCATG AGTTGCCGAC GCTGCTGCAA
CGTATTTATC GCGGTGAAGA TGCGTTGCCG GCCGTGGCGG CGTTTCAGCC TGCGGTGAGT
TATAGCCGCA CCGAGAATGG CGATATTCAT CTGCTGGTGG TGGATGACCA CCCGATTAAC
CGCCGTTTGC TGGCTGACCA GCTTGGGTCG CTGGGGTATC AGGTGATTAC CGCTAATGAT
GGGCTTGATG CGCTGGATGT GCTGGCGAAA AATCCGGTGG ACATTGTGCT TACCGATGTC
AACATGCCGA ATATGGACGG GTATCGTTTT ACTCAGCAAC TGCGGGAGAT GGGACAGACC
TTGCCGGTGA TTGGCGTTAC GGCCAATGCA TTGGCGGAAG AGCGGCAACG TTGTTTGCAA
GCCGGTATGG ATAATTGCTT GTCCAAGCCG GTAACGCTGG ATACATTGCA ACAATCACTG
TCGTATTACA GCCATCTCGT CAGACAGGGG AAAACGGCTC AGTCGTAA
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| Protein sequence | MPLKVIASFQ STLKISRYMF RVLATTLWIL GALISVFYVN KELNQRESHL RQIFSLNFEQ
SLGYIRHTTD VARELRYIAA NRFSVSSLSR ERKSSTPKTP FSIYPLSPTF NCGEQYAKTP
ALLQSLSGFF EQWHDDFSSV YDLNRLFFVD SSQQCIVDFS IRNQSLDSDS LLKSVQERLQ
NQNSNRVGNR REESLFWVVP GPTQEVGYLY ALTPVYVDNH LVTMMGIEQT IRLDDFMLNG
DLPFSVRLLD QNDHVLLQLT DNQSGGNSPT HYPDSNNYFG YSDGYGTLLM KKALPPTSMT
VVYSLPLEVI LMSLNTLIIN IALLNLALAI CLFLLARLFE RKIFLPAERN AFQLEENEQF
NRKIVASAPV GICILRISDG TNILSNELAH NYLSLLTYED RVRIVRIICE QQSKSLDVVT
GRNHHLQISF VHSRYRNENV AICVLLDVSA RVRMEESLQE MANAAEQASQ SKSMFLATVS
HELRTPLYGI IGNLDLLQTK SLPSDANRLV TAMQNSSALL LKIISDILDF SKIESEQLKI
EPSEFAPREV INHILNNYLP LVVKKRLELY CYIDPNVPSR LMGDAVRLQQ VLSNLLSNAI
KFTDTGCIVF QVACSDEGYL VFKVRDTGVG IDTRSVMKLF DPFFQAGTGV QRHFQGTGLG
LAICEKLVSL MDGDITIESE PGLGSEFGIR IPLYRAHYPQ TLQLSDLQGK TCWLHIRNAL
MERYLLGLLS ACGLDARRYD EGQAVGNDDV MIFDHTPDVE PKARVSVEIC ATHGGAPQEQ
RAGYWLYSTA VLHELPTLLQ RIYRGEDALP AVAAFQPAVS YSRTENGDIH LLVVDDHPIN
RRLLADQLGS LGYQVITAND GLDALDVLAK NPVDIVLTDV NMPNMDGYRF TQQLREMGQT
LPVIGVTANA LAEERQRCLQ AGMDNCLSKP VTLDTLQQSL SYYSHLVRQG KTAQS
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