Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4966 |
Symbol | |
ID | 4041828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1637062 |
End bp | 1639917 |
Gene Length | 2856 bp |
Protein Length | 951 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637980387 |
Product | two-component sensor response receiver component, histidine kinase |
Protein accession | YP_587097 |
Protein GI | 94313888 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.292915 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCATT CCAGTCCGAC GCGGATTGCC CGTCGACGCG TGGCTTCGTT CACCCTCATG CTGGCAGCGG TGCTGCTGCC GGTTGCGGCG TCCGCGGCAG CCGGTGAAGC GTCGGGGCGC CACGTTTATT TCCCGGCGGC GCAGCCAGTC GCTTTGGACG GCTCCAAGCC GCAGGATTCC GTTGTGGCCG GCACACCAGC GCAGGCGGCG GCGCCGTTGG GTGAAGACGA GCGGCGCTAC CTGGCCTCCC TGCCTCGGCT GCGCGTGCAA TTGCTGACTC AGTGGGCGCC GTTCACCTAC GAGGACGAGG ATGGTCAGCC CACCGGAATA CTGAGCGCCT ACCTGGCCTA CCTGAGTGAG ACCCTGGGCC TGCGTTTCGA TGTGAGTTCC GTCGCGGAGC CGGCCGAGTC CGGCCGGTTG AGGGCGGCCG GGCAGATCGA TCTCAATCAG TATGTCGAGC CGGCGGAGAT GGCGAATCGG CATCTCCCGA CCCGTACCCG TGCCGTCGAG TCCTATCCCC TTGTGATCGT TGGACGAACC GATTCCCCGG CCATCGGCGA ACTGTCCGAG CTTGCAGGCT TTCGGGTTGC CGTGGCCGCC AAGTCGGTCA TGGCCGATCT GGTGCGCGCG GCGGTACCGT CGGCGCCGAT CGTGACTGCT GCCTCGCCCG AGGCGGCGCT GGAGATGGTG CGGGACAACA AGGCCGATCT CTACATTGGC AATCTGGCTG CGCTGGATCG CGCTATTCAG AGCCGCTACG TGGGCCAACT CAAGGTTGTG GGCGCTACCA GGCTGCGGCA GCTCATCGGA TTCGATGTGC GGCCGGGGCT GGAGCCGCTC GTGCCGCTGA TCGATCGCGC CATCGAGGCC ATGCCACCGG AGCGGCGACA GGCGATCCGC AATCGATACC TGACCACGAC CTATCAGTTC GGTTTGTCGG GTAGCGAAAT CCGGCGGCGT GCCGCACCGT ACGTGGCGCT GGTCGTCACG GCGCTGGCGC TTCTGGCTCT CGGCTACTGG CGTCAGCGGC GGCAGGTCGC CATCCGCCTG CAGGCCGAGC GCGAACTCCA GCGGGCTCAT CGACTGGCCG AGGATGCGAA CGCAGCCAAG TCGATCTTTC TGGCGGCGAT GAGCCACGAG ATGCGGACGC CGTTGTACGG CATGTTGGGT ACGCTGGAAT TGTTGTCCCT GACCGCGCTG GATGATCGGC AGCGCCAGGA CGTCGGGACG ATTCAGACGT CGTCGGCCAC ATTGCTGTCG ATCATCGACG ATCTGCTGGA CTACACCAAG TTCGAGGGCG GGCAGCTCAC TCTGGAGTCC GTGGCGTTCG ATCCCGTGGA ACTGGTGGAG GCCGTAGCTC GATCCCACGC GCCGCTCGCA CTGCGCAAGG GATTGGCGCT GACCTGCTAT GTGCAGGCCG ATCTACCCTG GCTCATCGGC GATCCGGTCC GTGTCAGGCA GGCCCTCGAC AATTTTCTAA CCAACGCGTT GAAGTTTACG TCGGAAGGGC ACGTTGGCAT CCGGGCCTTC CGCGCCGCTT CGACGCCCTC GGACGAGACG ACGCTGTGTC TGGTGCTGGA AGTCCTCGAT ACCGGTATCG GCATGTCGCC AGGCACGCAG GCACAACTCT TCGAACCATT CGTTCAGGGT GATGCCACCA CGGCCCGGCG TTTCGGTGGG TCGGGCCTCG GCCTTTCGAT CTGCAGGAGG CTGGCCCGCC GGATGGGGGC CAGCATTGTC GTCGAGAGCG AGCTTGGGCG CGGCAGCCGC TTTTCCTTTT CCGTGCCCCT GGAGATTGGG GAGGCACGAC AGTCGGTCGA ACCGGCATTG CCCAATGTCG TCGTCCGGGC GCAGGACCCC GTATGGCGCG CGGATGTCAT CGCCATGATC CGCCAGTCAG GAGGAAGGGC AATTGCCTGC CAGGGCGACG CCACCGACCC GGGCACTATC CTGCTGATAG CGGACGAGAC GCAGGGCCCC GTGCCGAACG GATACGCCGG AGTGGTCAGG CTCAAGGCAA GTGGGCCGCT GGAGGCCGTG GCAAGGCCCG ATGGCCTGGT TGTATCCGCC TATCATCAGG CCGGCATCGT GCGCGCGCTG TGTCGGGCGG CAGGCATCCC GCTGACCAGC ACGGCGTCTC CGGTTCAACG TTCGACGCAG ATGTTGAAGC TGGATCTGCA GGTGCTGGCG GTGGACGACC ATCCGGTCAA TCGCCGGCTG ATGCAGCAGC AACTAGAACA GCTGGGTTGC CGGACGACCA TGGTCAGTAG TGGCGAGGAC GCATTGCTTG CTTGCAGGCA GGGCCAATTC GATGCGGTGC TGACCGATGT GCACATGCCA GGGATGGACG GCTATGCACT TGCGCATGCC TTGCGCGCGG ACGGCTTCAC CATCCCGATC ATCGGCGTCA CCGCCAGCGT GGCCACCGGA GAGGCCGAGC GCTGCGTGGC ATCGGGGATG AACGGACATC TCACCAAGCC TGTTCTGTTG CAGGCCCTTG CCGATAGCCT CAGGCAGGTG TTGCCGGACC GAAGTGAAGC GCTGGCGACG GCAGCCAGGA GCGCCGCCGA ACTGCCTCAG GGCGACGTCT CGCAAGATGA CCGGTTGCTG CTGATACGCA CGGTCTGGGA AGACGCGCGG GCCATCAGGC AGGCTGTCGA GCAGAAGAAT CTCGGGACCG TGGCCGAGCG CGCGCATCGC GTTCGCGGCG CCGTCGCGCA TTTGCATGAC TGGGAGGAGG TGGCGGACCT GTGCAGGGAA CTCGAAGCCG TGGCGCGCGA CGCGTTCGAT GGCGCCAAAC AGCTCGCCGA TGACCTGGAC GGCTACCTGC AGGTGTACCT CGAAGCCGAG TCATAG
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Protein sequence | MWHSSPTRIA RRRVASFTLM LAAVLLPVAA SAAAGEASGR HVYFPAAQPV ALDGSKPQDS VVAGTPAQAA APLGEDERRY LASLPRLRVQ LLTQWAPFTY EDEDGQPTGI LSAYLAYLSE TLGLRFDVSS VAEPAESGRL RAAGQIDLNQ YVEPAEMANR HLPTRTRAVE SYPLVIVGRT DSPAIGELSE LAGFRVAVAA KSVMADLVRA AVPSAPIVTA ASPEAALEMV RDNKADLYIG NLAALDRAIQ SRYVGQLKVV GATRLRQLIG FDVRPGLEPL VPLIDRAIEA MPPERRQAIR NRYLTTTYQF GLSGSEIRRR AAPYVALVVT ALALLALGYW RQRRQVAIRL QAERELQRAH RLAEDANAAK SIFLAAMSHE MRTPLYGMLG TLELLSLTAL DDRQRQDVGT IQTSSATLLS IIDDLLDYTK FEGGQLTLES VAFDPVELVE AVARSHAPLA LRKGLALTCY VQADLPWLIG DPVRVRQALD NFLTNALKFT SEGHVGIRAF RAASTPSDET TLCLVLEVLD TGIGMSPGTQ AQLFEPFVQG DATTARRFGG SGLGLSICRR LARRMGASIV VESELGRGSR FSFSVPLEIG EARQSVEPAL PNVVVRAQDP VWRADVIAMI RQSGGRAIAC QGDATDPGTI LLIADETQGP VPNGYAGVVR LKASGPLEAV ARPDGLVVSA YHQAGIVRAL CRAAGIPLTS TASPVQRSTQ MLKLDLQVLA VDDHPVNRRL MQQQLEQLGC RTTMVSSGED ALLACRQGQF DAVLTDVHMP GMDGYALAHA LRADGFTIPI IGVTASVATG EAERCVASGM NGHLTKPVLL QALADSLRQV LPDRSEALAT AARSAAELPQ GDVSQDDRLL LIRTVWEDAR AIRQAVEQKN LGTVAERAHR VRGAVAHLHD WEEVADLCRE LEAVARDAFD GAKQLADDLD GYLQVYLEAE S
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