| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0507 |
|---|
| Symbol | |
|---|
| ID | 4572878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 530170 |
|---|
| End bp | 530880 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639754544 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_900196 |
|---|
| Protein GI | 118578946 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGGG ATACGGAAAA ACCGCACATC ATGCTGGTCG AGGACGAGAT TCACCTGGCG
CGGGGGATCT GTTTCAACCT GGAGGAAGAT GGATGCCGGA TCAGCCACTT CGCCACCGGC
GAGAAGGCAC TGGAAGCGCT GCAGTTCGAG CATTTCGACC TGATCATCCT GGACGTGATG
CTCCCCGGCA TGGACGGCTT CCAGGTCTGC CAGTCGGTGC GCCGGATGGA CGGGCGGGTG
CCGATCCTGA TGCTCACCGC CCGCTCCGAG GAGAGCGACC GGGTGCACGG CCTGGAGACC
GGCGCCGACG ACTACCTGAC CAAGCCGTTC AACCTGGTGG AATTCCTGCT GCGGGTCAAG
GGGATGCTGC GCCGCTCCTC CTGGTACCGT CCCGACCCGG TGGAGGAGGG GTATTGCTTC
GGCTCCAACG AGGTGTTCCT GCTCTCCTAC CGCGCCCGCA CCGCCCAGGG AGAGATCGAC
CTGACCGAGA TGGAGGTGAG GGTACTGTCG ATCTTCTTCC AGAAGGAGGG TCAGGCCATC
CCGCGGGGGG AGCTGCTCCA GAAGGTGTGG GGCTACAGCA GCGACACTGA GACCAGGACC
CTGGACAACT TTATCGTCCG CCTGCGCCGC TACTTCGAGC CGGACCCGGC CAAGCCGACG
CACTTCCAGA CCGTGCGCGG GGTGGGGTAC AGGTTCAGCA GGAAGGGGTA G
|
|---|
| Protein sequence | MNRDTEKPHI MLVEDEIHLA RGICFNLEED GCRISHFATG EKALEALQFE HFDLIILDVM
LPGMDGFQVC QSVRRMDGRV PILMLTARSE ESDRVHGLET GADDYLTKPF NLVEFLLRVK
GMLRRSSWYR PDPVEEGYCF GSNEVFLLSY RARTAQGEID LTEMEVRVLS IFFQKEGQAI
PRGELLQKVW GYSSDTETRT LDNFIVRLRR YFEPDPAKPT HFQTVRGVGY RFSRKG
|
|---|
| |