More than 300 homologs were found in PanDaTox collection
for query gene Huta_0643 on replicon NC_013158
Organism: Halorhabdus utahensis DSM 12940



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013158  Huta_0643  3-isopropylmalate dehydratase, small subunit  100 
 
 
206 aa  421  1e-117  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_013743  Htur_2764  3-isopropylmalate dehydratase, small subunit  80.4 
 
 
211 aa  315  3e-85  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_012029  Hlac_0871  3-isopropylmalate dehydratase, small subunit  73.4 
 
 
217 aa  311  3.9999999999999997e-84  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_013202  Hmuk_2657  3-isopropylmalate dehydratase, small subunit  77.67 
 
 
214 aa  310  1e-83  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_013922  Nmag_0900  3-isopropylmalate dehydratase, small subunit  73.13 
 
 
223 aa  304  7e-82  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_014248  Aazo_5027  3-isopropylmalate dehydratase small subunit  50.76 
 
 
201 aa  214  5.9999999999999996e-55  'Nostoc azollae' 0708  Bacteria  normal  0.162476  n/a   
 
 
-
 
NC_007413  Ava_3966  isopropylmalate isomerase small subunit  48.47 
 
 
202 aa  211  7e-54  Anabaena variabilis ATCC 29413  Bacteria  normal  0.05677  normal  0.0175805 
 
 
-
 
NC_011729  PCC7424_3629  isopropylmalate isomerase small subunit  49.25 
 
 
206 aa  206  2e-52  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013161  Cyan8802_3810  isopropylmalate isomerase small subunit  47.94 
 
 
197 aa  205  4e-52  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_3761  isopropylmalate isomerase small subunit  47.94 
 
 
197 aa  205  4e-52  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010571  Oter_2681  isopropylmalate isomerase small subunit  46.7 
 
 
201 aa  203  1e-51  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007335  PMN2A_1621  3-isopropylmalate dehydratase, small subunit  47.96 
 
 
206 aa  200  9.999999999999999e-51  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2548  isopropylmalate isomerase small subunit  51.28 
 
 
202 aa  199  1.9999999999999998e-50  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0488432  normal 
 
 
-
 
NC_008819  NATL1_03331  3-isopropylmalate dehydratase small subunit  47.96 
 
 
206 aa  198  3.9999999999999996e-50  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1327  3-isopropylmalate dehydratase, small subunit  44.39 
 
 
197 aa  197  1.0000000000000001e-49  Cyanothece sp. PCC 7425  Bacteria  normal  0.507856  normal  0.452578 
 
 
-
 
NC_013946  Mrub_1847  3-isopropylmalate dehydratase small subunit  48.96 
 
 
201 aa  192  4e-48  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1602  3-isopropylmalate dehydratase, small subunit  52.57 
 
 
201 aa  191  7e-48  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0187865 
 
 
-
 
NC_007577  PMT9312_0257  3-isopropylmalate dehydratase, small subunit  43.07 
 
 
207 aa  188  5.999999999999999e-47  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.420219  n/a   
 
 
-
 
NC_008816  A9601_02771  3-isopropylmalate dehydratase small subunit  43.07 
 
 
207 aa  182  3e-45  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.385201  n/a   
 
 
-
 
NC_008820  P9303_24681  3-isopropylmalate dehydratase small subunit  44.85 
 
 
210 aa  181  5.0000000000000004e-45  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_014148  Plim_0321  3-isopropylmalate dehydratase, small subunit  45.45 
 
 
203 aa  181  9.000000000000001e-45  Planctomyces limnophilus DSM 3776  Bacteria  hitchhiker  0.00352929  n/a   
 
 
-
 
NC_007513  Syncc9902_2087  3-isopropylmalate dehydratase small subunit  45.6 
 
 
204 aa  176  2e-43  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_0257  3-isopropylmalate dehydratase, small subunit  44.56 
 
 
204 aa  176  3e-43  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_009976  P9211_02811  3-isopropylmalate dehydratase small subunit  41.88 
 
 
207 aa  172  2.9999999999999996e-42  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_009091  P9301_02781  3-isopropylmalate dehydratase small subunit  41.67 
 
 
212 aa  171  5e-42  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_02881  3-isopropylmalate dehydratase small subunit  39.8 
 
 
206 aa  169  2e-41  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.130398  n/a   
 
 
-
 
NC_010655  Amuc_0667  isopropylmalate isomerase small subunit  42.49 
 
 
202 aa  166  2e-40  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1545  aconitate hydratase domain protein  41.58 
 
 
209 aa  151  7e-36  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.831045  n/a   
 
 
-
 
NC_009457  VC0395_A2068  isopropylmalate isomerase small subunit  36.27 
 
 
200 aa  134  8e-31  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0338  isopropylmalate isomerase small subunit  38.22 
 
 
201 aa  130  1.0000000000000001e-29  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00370617  normal  0.442563 
 
 
-
 
NC_013456  VEA_001659  3-isopropylmalate dehydratase small subunit  34.72 
 
 
200 aa  129  2.0000000000000002e-29  Vibrio sp. Ex25  Bacteria  normal  0.57325  n/a   
 
 
-
 
NC_009832  Spro_0742  isopropylmalate isomerase small subunit  35.57 
 
 
200 aa  129  2.0000000000000002e-29  Serratia proteamaculans 568  Bacteria  normal  0.843634  normal 
 
 
-
 
NC_009783  VIBHAR_00814  isopropylmalate isomerase small subunit  34.72 
 
 
200 aa  129  4.0000000000000003e-29  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007493  RSP_0862  isopropylmalate isomerase small subunit  37.69 
 
 
201 aa  128  5.0000000000000004e-29  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2521  isopropylmalate isomerase small subunit  37.69 
 
 
201 aa  128  5.0000000000000004e-29  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0588786  normal 
 
 
-
 
NC_007802  Jann_0123  isopropylmalate isomerase small subunit  39.41 
 
 
201 aa  128  6e-29  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1548  isopropylmalate isomerase small subunit  39.58 
 
 
204 aa  128  6e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.165609  normal  0.0663452 
 
 
-
 
NC_009484  Acry_2148  3-isopropylmalate dehydratase, small subunit  36.84 
 
 
207 aa  127  1.0000000000000001e-28  Acidiphilium cryptum JF-5  Bacteria  normal  0.0323042  n/a   
 
 
-
 
NC_010085  Nmar_0423  3-isopropylmalate dehydratase small subunit  33.68 
 
 
194 aa  127  1.0000000000000001e-28  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.0497347 
 
 
-
 
NC_008309  HS_0389  isopropylmalate isomerase small subunit  32.99 
 
 
200 aa  127  1.0000000000000001e-28  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0396  isopropylmalate isomerase small subunit  39.27 
 
 
201 aa  127  2.0000000000000002e-28  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000184497 
 
 
-
 
NC_010506  Swoo_4547  isopropylmalate isomerase small subunit  37.7 
 
 
201 aa  125  3e-28  Shewanella woodyi ATCC 51908  Bacteria  normal  0.258236  normal  0.011903 
 
 
-
 
NC_009052  Sbal_0389  isopropylmalate isomerase small subunit  36.84 
 
 
201 aa  125  4.0000000000000003e-28  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2509  isopropylmalate isomerase small subunit  36.6 
 
 
201 aa  125  4.0000000000000003e-28  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_3817  isopropylmalate isomerase small subunit  36.65 
 
 
201 aa  125  4.0000000000000003e-28  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1564  isopropylmalate isomerase small subunit  36.23 
 
 
215 aa  125  4.0000000000000003e-28  Marinobacter aquaeolei VT8  Bacteria  normal  0.126411  n/a   
 
 
-
 
NC_009952  Dshi_0083  isopropylmalate isomerase small subunit  37.43 
 
 
201 aa  125  5e-28  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.384389  normal  0.18722 
 
 
-
 
NC_011094  SeSA_A0126  isopropylmalate isomerase small subunit  35.79 
 
 
201 aa  125  5e-28  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.899902  normal  0.029238 
 
 
-
 
NC_011312  VSAL_I0374  isopropylmalate isomerase small subunit  34.72 
 
 
200 aa  125  6e-28  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0159  isopropylmalate isomerase small subunit  35.71 
 
 
201 aa  125  6e-28  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.949563  normal 
 
 
-
 
NC_011149  SeAg_B0126  isopropylmalate isomerase small subunit  35.26 
 
 
201 aa  124  8.000000000000001e-28  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C0121  isopropylmalate isomerase small subunit  35.26 
 
 
201 aa  124  8.000000000000001e-28  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.886111  normal  0.157977 
 
 
-
 
NC_011205  SeD_A0119  isopropylmalate isomerase small subunit  36.26 
 
 
201 aa  124  9e-28  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A0122  isopropylmalate isomerase small subunit  34.74 
 
 
201 aa  124  1e-27  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.14126  normal  0.46492 
 
 
-
 
NC_011663  Sbal223_0414  isopropylmalate isomerase small subunit  35.79 
 
 
201 aa  124  1e-27  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000110574 
 
 
-
 
NC_009997  Sbal195_0400  isopropylmalate isomerase small subunit  35.79 
 
 
201 aa  124  1e-27  Shewanella baltica OS195  Bacteria  normal  hitchhiker  0.000488217 
 
 
-
 
NC_012880  Dd703_0629  isopropylmalate isomerase small subunit  35.26 
 
 
200 aa  124  1e-27  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0388  isopropylmalate isomerase small subunit  35.79 
 
 
201 aa  124  1e-27  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0279  3-isopropylmalate dehydratase, small subunit  37.7 
 
 
195 aa  124  1e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0619  isopropylmalate isomerase small subunit  34.54 
 
 
201 aa  122  3e-27  Enterobacter sp. 638  Bacteria  normal  normal  0.12131 
 
 
-
 
NC_009719  Plav_1424  3-isopropylmalate dehydratase, small subunit  35.48 
 
 
201 aa  122  3e-27  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_0078  isopropylmalate isomerase small subunit  34.74 
 
 
201 aa  122  5e-27  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_0591  isopropylmalate isomerase small subunit  34.74 
 
 
200 aa  122  5e-27  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0076  isopropylmalate isomerase small subunit  34.54 
 
 
201 aa  122  5e-27  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_2092  isopropylmalate isomerase small subunit  34.97 
 
 
200 aa  122  5e-27  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_00073  isopropylmalate isomerase small subunit  34.54 
 
 
201 aa  121  6e-27  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3527  3-isopropylmalate dehydratase, small subunit  34.54 
 
 
201 aa  121  6e-27  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0074  isopropylmalate isomerase small subunit  34.54 
 
 
201 aa  121  6e-27  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1960  isopropylmalate isomerase small subunit  37.89 
 
 
204 aa  121  6e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_3586  isopropylmalate isomerase small subunit  34.54 
 
 
201 aa  121  6e-27  Escherichia coli ATCC 8739  Bacteria  normal  hitchhiker  0.0000223756 
 
 
-
 
NC_012892  B21_00072  hypothetical protein  34.54 
 
 
201 aa  121  6e-27  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0474  isopropylmalate isomerase small subunit  36.32 
 
 
201 aa  121  6e-27  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0065  isopropylmalate isomerase small subunit  34.54 
 
 
201 aa  121  6e-27  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0076  isopropylmalate isomerase small subunit  34.74 
 
 
201 aa  121  9e-27  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.28946 
 
 
-
 
NC_008009  Acid345_2915  3-isopropylmalate dehydratase, small subunit  36.47 
 
 
195 aa  121  9e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0827  isopropylmalate isomerase small subunit  35.68 
 
 
211 aa  121  9e-27  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2939  isopropylmalate isomerase small subunit  35.45 
 
 
200 aa  120  9.999999999999999e-27  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0883  isopropylmalate isomerase small subunit  35.59 
 
 
201 aa  120  9.999999999999999e-27  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3538  isopropylmalate isomerase small subunit  35.45 
 
 
200 aa  120  9.999999999999999e-27  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_0014  isopropylmalate isomerase small subunit  34.97 
 
 
200 aa  120  9.999999999999999e-27  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0372  isopropylmalate isomerase small subunit  36.31 
 
 
201 aa  120  9.999999999999999e-27  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0215  isopropylmalate isomerase small subunit  38.55 
 
 
202 aa  120  9.999999999999999e-27  Caulobacter sp. K31  Bacteria  normal  normal  0.20437 
 
 
-
 
NC_010581  Bind_0216  3-isopropylmalate dehydratase, small subunit  34.46 
 
 
201 aa  120  9.999999999999999e-27  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.247072  normal  0.136168 
 
 
-
 
NC_011658  BCAH187_A1562  isopropylmalate isomerase small subunit  35 
 
 
193 aa  120  9.999999999999999e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1886  isopropylmalate isomerase small subunit  34.43 
 
 
200 aa  119  1.9999999999999998e-26  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3408  isopropylmalate isomerase small subunit  34.92 
 
 
200 aa  119  1.9999999999999998e-26  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3825  isopropylmalate isomerase small subunit  37.5 
 
 
201 aa  120  1.9999999999999998e-26  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_5021  3-isopropylmalate dehydratase, small subunit  37.21 
 
 
214 aa  119  1.9999999999999998e-26  Pseudomonas putida F1  Bacteria  normal  0.447275  normal 
 
 
-
 
NC_008322  Shewmr7_0371  isopropylmalate isomerase small subunit  35.6 
 
 
201 aa  120  1.9999999999999998e-26  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_2522  isopropylmalate isomerase small subunit  34.87 
 
 
201 aa  120  1.9999999999999998e-26  Paracoccus denitrificans PD1222  Bacteria  normal  0.68534  normal 
 
 
-
 
NC_007954  Sden_0337  isopropylmalate isomerase small subunit  36.09 
 
 
201 aa  119  3e-26  Shewanella denitrificans OS217  Bacteria  normal  0.999258  n/a   
 
 
-
 
NC_012856  Rpic12D_1446  3-isopropylmalate dehydratase, small subunit  31.58 
 
 
215 aa  119  3e-26  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.00452839  normal  0.703119 
 
 
-
 
NC_011369  Rleg2_3898  isopropylmalate isomerase small subunit  35.67 
 
 
202 aa  119  3.9999999999999996e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.106034  normal  0.223457 
 
 
-
 
NC_007947  Mfla_1704  isopropylmalate isomerase small subunit  34.13 
 
 
214 aa  119  3.9999999999999996e-26  Methylobacillus flagellatus KT  Bacteria  normal  0.045793  hitchhiker  0.00210823 
 
 
-
 
NC_011365  Gdia_3281  isopropylmalate isomerase small subunit  37.06 
 
 
207 aa  118  4.9999999999999996e-26  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.186191  normal 
 
 
-
 
NC_006670  CNA02270  3-isopropylmalate dehydratase, putative  36.04 
 
 
762 aa  118  4.9999999999999996e-26  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.0205062  n/a   
 
 
-
 
NC_011773  BCAH820_1494  isopropylmalate isomerase small subunit  34.44 
 
 
193 aa  119  4.9999999999999996e-26  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_010682  Rpic_1382  3-isopropylmalate dehydratase, small subunit  31.58 
 
 
215 aa  118  4.9999999999999996e-26  Ralstonia pickettii 12J  Bacteria  normal  0.758839  normal  0.419844 
 
 
-
 
NC_009092  Shew_3469  isopropylmalate isomerase small subunit  37.28 
 
 
201 aa  118  4.9999999999999996e-26  Shewanella loihica PV-4  Bacteria  normal  0.068645  normal  0.363086 
 
 
-
 
NC_005945  BAS1314  isopropylmalate isomerase small subunit  34.44 
 
 
193 aa  118  6e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
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