Gene Gdia_3281 details

Gene Information

• Locus tag: Gdia_3281
• Symbol: leuD
• ID: 6976720
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gluconacetobacter diazotrophicus PAl 5
• Kingdom: Bacteria
• Replicon accession: NC_011365
• Strand: +
• Start bp: 3589829
• End bp: 3590452
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643392791
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_002277623
• Protein GI: 209545394
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.186191
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 50
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAGAAAT TCACCGTCCT GACCGCGATC GCGGCGCCGC TGCCCGAAGC GAACATCGAC 
ACGGACAAGA TCATTCCCGC CCGGTTCCTG AAGACCACCA AGCGGTCGGG GCTGGGCGTG 
CATGCCTTCG ACGGCATGCG CTACAATCCG GACGGGTCCG AAAAGCCCGA TTTCGTGCTG 
AACCAGGCGC CCTATCGCCA GGCCGGCATC CTGATCACTT ACGACAATCT CGGCTGCGGT 
TCGTCGCGCG AACATGCGCC GTGGGCGCTG CTGGATTTCG GCATCCGCTG CGTGATCGCG 
CCGTCCTTTG CGGATATCTT CTTCAATAAC TGCTTCAAGA ACGGAATCCT GCCGATCCGG 
CTGCCGCGCG AGGTCTGCGA CGCGCTGATG GACGATGCGC GGCTGGGCGG CAACGGCCGG 
CTGACGGTCG ATCTGGAACG CCAGGTGGTC ATCCGCCCGG ACGGCGCCGA AATCGCCTTC 
GAGATCGATC CGCTGCGCCG GCACCTGCTG CTGGAAGGGC TGGACGATAT CGGCCAGACC 
CTGCAGCACG AAGGCGCGAT CGACACTTTC GAGGCCACGC GCGAACGGGC CCAGCCCTGG 
CAGACGCGGA TCGTCATCGA CTGA 

 

Protein sequence

MEKFTVLTAI AAPLPEANID TDKIIPARFL KTTKRSGLGV HAFDGMRYNP DGSEKPDFVL 
NQAPYRQAGI LITYDNLGCG SSREHAPWAL LDFGIRCVIA PSFADIFFNN CFKNGILPIR 
LPREVCDALM DDARLGGNGR LTVDLERQVV IRPDGAEIAF EIDPLRRHLL LEGLDDIGQT 
LQHEGAIDTF EATRERAQPW QTRIVID