Gene Mpop_0372 details

Gene Information

• Locus tag: Mpop_0372
• Symbol: leuD
• ID: 6310856
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium populi BJ001
• Kingdom: Bacteria
• Replicon accession: NC_010725
• Strand: +
• Start bp: 395290
• End bp: 395895
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642649072
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001923085
• Protein GI: 188579640
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAAAAGT TCACGACCCT GGAGGGCGTC GCCGCGCCCA TGCGGATCAT CAACATCGAC 
ACCGACCGCA TCATCCCGAA GCAGTATCTC AAGACGATCA AGCGCACCGG CCTCGGCCAG 
GGCCTGTTCT CGGAAATGCG CTACAACGAC GACGGCTCGG AGAACCCGGA TTTCGTCCTC 
AACCAGCCGG CCTACCGCAA CGCCAAGATC CTCGTCGTCG GCGACAATTT CGGCTGCGGC 
TCGTCGCGCG AGCATGCGCC CTGGGCGCTG GCCGATTTCG GCATCCGCTG CGTGATCTCC 
ACGAGCTTCG CCGACATCTT CTTCAACAAC TGCGCCAAGA ACGGCATCCT GGCCATCGTC 
GTACCGCCCG AGGATCTGGA GAAGCTGTTC GAGGACGCGG AGCGCGGCGC CAACGCGACG 
CTGACGATCG ATCTCGCGGC GCAGACCATC AAGGGACCCG ACGGCGGCAC CCTGCATTTC 
GACATCGACG AGGGCCGCAA GCACAACCTG CTCAATGGCC TCGACGAGAT CGGCCTGACC 
CTCGACCAGA AGGCGCCTGC GATCGAGGCC TACGAGGCGA AGCTCGCTCA GCGCGAATGG 
GCCTGA 

 

Protein sequence

MEKFTTLEGV AAPMRIINID TDRIIPKQYL KTIKRTGLGQ GLFSEMRYND DGSENPDFVL 
NQPAYRNAKI LVVGDNFGCG SSREHAPWAL ADFGIRCVIS TSFADIFFNN CAKNGILAIV 
VPPEDLEKLF EDAERGANAT LTIDLAAQTI KGPDGGTLHF DIDEGRKHNL LNGLDEIGLT 
LDQKAPAIEA YEAKLAQREW A