| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0122 |
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| Symbol | leuD |
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| ID | 6486433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 130840 |
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| End bp | 131445 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642735561 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_002039343 |
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| Protein GI | 194444357 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.14126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.46492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAGA AATTTACCCA GCATACCGGC CTGGTTGTCC CACTGGATGC CGCCAACGTC
GATACCGATG CAATTATCCC TAAACAGTTT TTGCAGAAGG TTACGCGCAC CGGTTTTGGC
GCCCATCTGT TTAACGACTG GCGTTTCCTG GACGAAAAGG GCCAACAACC AAATCCGGAA
TTCGTGCTGA ACTTTCCGGA ATATCAAGGC GCGTCGATCC TGTTGGCGCG GGAAAACTTT
GGCTGCGGCT CGTCACGCGA GCACGCGCCG TGGGCGTTGA CCGATTACGG CTTTAAAGTG
GTGATCGCGC CAAGCTTCGC CGACATTTTC TACGGCAACA GTTTCAATAA CCAACTGCTG
CCGGTAACCC TGAGCGACGC ACAGGTCGAT GAAATGTTTG CTCTGGTGAA AGCCAATCCG
GGCATTAAAT TTGAAGTGGA TCTGGAGGCA CAGGTGGTGA AAGCAGGCGA TAAGACCTAC
AGCTTTAAAA TCGACGACTT CCGCCGCCAC TGCATGTTGA ACGGTCTGGA CAGCATTGGG
CTGACGCTGC AGCACGAAGA CGCGATTGCC GAGTACGAAA ATAAACAACC GGCATTTATG
CGGTAA
|
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| Protein sequence | MAEKFTQHTG LVVPLDAANV DTDAIIPKQF LQKVTRTGFG AHLFNDWRFL DEKGQQPNPE
FVLNFPEYQG ASILLARENF GCGSSREHAP WALTDYGFKV VIAPSFADIF YGNSFNNQLL
PVTLSDAQVD EMFALVKANP GIKFEVDLEA QVVKAGDKTY SFKIDDFRRH CMLNGLDSIG
LTLQHEDAIA EYENKQPAFM R
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