| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5021 |
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| Symbol | |
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| ID | 5194298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5648212 |
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| End bp | 5648856 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640589506 |
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| Product | 3-isopropylmalate dehydratase, small subunit |
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| Protein accession | YP_001270325 |
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| Protein GI | 148550223 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.447275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACCAT TCACTTTCAT AAAAAGTAAG GTTGTTCCGT TGGATCGCGC CAATGTGGAC
ACTGACGCTA TTCTGCCAAA GCAATTCCTG ATGATTATCG AGCGCAGTGG TTTTGGCCAG
CATCTTTTTG ATGAGTGGCG TTATCTCGAC CATGGAGTCC CCTATCAGGA CTGTTCAAAT
AGGCCACTTA ATTTAAGTTT TCCGTTGAAT CAGCCGCGCT TTGAAGGCGC TGGGGTTCTC
TTGACTCGGG GAAATTTTGG TTGTGGTTCT AGCCGGGAAC ATGCTCCTTG GGCTTTGCAT
GACTGGGGAA TTAGGGCGAT TATAGCGCCA AGTTTCGCGG AGATATTTTA TGGAAACTGT
TTCAAAAATG GAATTCTACC AATCATTCTA GATGAGGCTA CTGTCGAAAA ATTATTCCTA
GCAGTTGAGC ATCTGCCAGG CTATCAACTC AGTATTGACC TTAAAAAGCA AGAAATTGTT
GACGAACAAG GAAACCTCCT TTCCTTTGAT ATCGACCCAT TCCGAAAGCA CTGCTTGCTT
AATGGTTTGG ACGAAGTGGG AATGACCTTG CTCAAAGCCG GCGCTATTCA ACAGTTCGAG
AAAGCACGAA TAGACTTGGA GCCATGGCTT TACCAGAGGT TTTAG
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| Protein sequence | MQPFTFIKSK VVPLDRANVD TDAILPKQFL MIIERSGFGQ HLFDEWRYLD HGVPYQDCSN
RPLNLSFPLN QPRFEGAGVL LTRGNFGCGS SREHAPWALH DWGIRAIIAP SFAEIFYGNC
FKNGILPIIL DEATVEKLFL AVEHLPGYQL SIDLKKQEIV DEQGNLLSFD IDPFRKHCLL
NGLDEVGMTL LKAGAIQQFE KARIDLEPWL YQRF
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