| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA02270 |
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| Symbol | |
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| ID | 3253624 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006670 |
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| Strand | + |
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| Start bp | 591219 |
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| End bp | 593843 |
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| Gene Length | 2625 bp |
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| Protein Length | 762 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638252559 |
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| Product | 3-isopropylmalate dehydratase, putative |
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| Protein accession | XP_566619 |
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| Protein GI | 58258413 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit
[COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit
[TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0205062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATAAAAAGTA ACCTAACTCA TACATACTGT AAGTCCTGTC CTTCTATCTC GTGTCCGCTC
TCCATCTGGG CTTTCCGCTA AGTCTTTCCT GGCCGCCACT TAGCCCCACC ATAATGCCTG
CTCCGATAAC CACTCCTAGG ACTCTTTATG ACAAAGTCTT TGACGATCAC GTCGTACACT
CCGGGGAAGG CGATACCCTT ATCTACATCG ACCGCCATCT TGTTCACGAA GTTACTTCTC
CTCAAGCTTT TGAAGGTTTG AGAAATGCTG GACGAAAAGT TCGCAGACCG GACTGTACAC
TTGTCACTGT CGACCACAAC ATTCCGTGAG TAGCTGGGGA CCAGTAACTT GCCGTGTATT
TGAGCTAACC GATACGACGC TATACAGTAC CATTTCTCGT AAGAATTTCA AGAACGTCAA
CACTTTCATT GGTGAGGCGG ACAGTCGGGC GCAGGTTGCC GCCCTCGAAG ACAATGTGAA
GGAGTTTGGC CTCACATACT TCGGTATGAA CGACAAGCGA CAAGGTATGA GTTCTATGGC
AGTACGCTTC CTTATAATTC TGATGCACTG TCTTAGGCAT TGTTCACATC ATCGGTCCAG
AGCAAGGATT CACTCTTCCC GGTACAACTG TTTGCTGCGG TGATTCCCAC ACTTCCAGTA
AGCCAGTTGC TTGATAATTG TGTGAGTTTA CGCTCACGTA AGATTTTAGC CCACGGTGCT
TTTGGTGCCC TTGCTTTCGG TATCGGCACT TCTGAAGTGG AACACATCCT TGCTACCCAA
ACTCTCCCCC AAGCCAAGTC TAAGAACATG CGCATCAATG TTGAGGGTAC TCTTGCCGAG
GGTGTGTCCT CTAAAGACAT TGTTCTTCAT ATCATTGGCG TGATTGGTAC TGCTGGTGGT
ACTGGTTGTG TCATTGAGTT CTCTGGGTCA ACAATCCGAG CGCTCAGTAT GGAGGCAAGA
ATGTCCATCT GTAACATGGC TATTGAAGGA GGTGCTAGGG CCGGCATGAT CGCCCCTGAT
GAGATTACTT TCGAATACCT CAAGGGACGT CCTCTCAGCC CTAGAGAAGG TGAGGAATGG
GATAAGGCAG TAGAGTACTG GAAAACCCTG AAGACGGATC CCGGAGCCAA GTACGATATC
GAGGTTGAGA TCAAGGCTGA AGACATCGTG CCTACCCTCA CCTGGGGTAC TTCTCCTCAG
GATGTTGTAC CTATCACTGG TGTCGTTCCT AACCCCGACG ATTTCCCCGA AGCTCAGCGA
GGTAATATTG TTCGAGCTCT CGAATACATG GGGCTTACCT CCGGTACCCC TATGGAGAAG
GTCAAGATTG ACAAGGCTTT CTTCGGCTCT TGTACCAACG GTCGTATCGA AGACATGCGC
TCTGCTGCTC GTGTTATCCT TGCTTCCCAG AAAAATGGTG GGCCTTCCAA GGTCGCGGAT
GGTGTCTACG CTATGATCGT TCCTGGTTCC GGTTTAGTCA AGCAACAAGC GGAAGCCGAA
GGTCTTGACG TCATTTTCAA GAAGGCGGGC TTTGACTGGC GAGAGGCTGG TTGCTCCATG
TGTCTTGGTA TGAACCCGGA CCAGCTCAAG CCCGGAGAGC GATGCGCCAG TACTTCGAAC
AGAAACTTCG AAGGTCGACA AGGCGCCGGT GGCCGAACTC ATCTCATGTC CCCTGCAATG
GTAGCGGCCG CTTCCCTTAC TGGTTATCTC ACCGATGTTC GTACACTCAT GGGCTCCCAC
GCTAATGATG ATGGACTCAA AATCACATCA TATTTCGACT ATCTCACACC TGTCGAAGTG
CCGGCTCAAC CCACTGAGCC TACTGAGGAG ACCGAAGAGG GTAAGACTCC GGTCAAGGCC
GCTGCTGCTG GCTCTGCCGG CTTGCCTAAA TTTAACGTCC TTCGAGGCAT CGCTGCCCCC
ATGTGGGAGG CCAACATCGA CACCGACAAA ATCATCCCTA AGCAGTTCTT GAAGACTCTT
CTTCGTACTG GTCTCGGCAA GGCTCTCTTC TGGCCCCTTC GATACGATGT CGAGACCAAT
GAAGAGATCC CTGATTTCGT GCTCAACAAG GAGCCTTATA GGCATGCCAG TATCATTGTC
TGCACTGGTC CTAACTTCGG TTGTGGTTCT TCTCGTGAAC ATGCTCCTTG GGCTCTTAAC
GATTTCGGTA TTCGATGTGT GATGGCGCCA TCTTTTGGTG ACATCTTCAA AACCAAGTAA
GTCCTACTCT CTTGTCTCAT CTACAAACCA TGCTCAATGT CCTTTTAGCT GCTTCAAGAA
CGGTATGCTT CCTCTTCAGC TTCCCCAAGC CGACCTCGAT ACCCTCTATG AAGATGCTTC
AGCTGGTCTT GAGATTACGG TCGATCTTGA GAACCAAGTG ATCGTCCGAC CCAACGGCAA
GCCATCCATT CCTTTCTCTG TTGACCCCTT CCGACGACAT TGCCTTATTA ATGGTCTCGA
TGATATTGGT CTTACACTTG TCCACCGAGA CGAAATTGAG AAGTTTGAAG GGAAGAGGAC
CGCGGTCTGG CCTTGGCTTG ACGGTGTTGG ATATGCCAAG AAGGGACAGA AGGTCATCGC
TGTGCCCGTT AGGAAGGGCG CCAGGAAGAC GGACTGGTAA GGGCA
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| Protein sequence | MPAPITTPRT LYDKVFDDHV VHSGEGDTLI YIDRHLVHEV TSPQAFEGLR NAGRKVRRPD
CTLVTVDHNI PTISRKNFKN VNTFIGEADS RAQVAALEDN VKEFGLTYFG MNDKRQGIVH
IIGPEQGFTL PGTTVCCGDS HTSTHGAFGA LAFGIGTSEV EHILATQTLP QAKSKNMRIN
VEGTLAEGVS SKDIVLHIIG VIGTAGGTGC VIEFSGSTIR ALSMEARMSI CNMAIEGGAR
AGMIAPDEIT FEYLKGRPLS PREGEEWDKA VEYWKTLKTD PGAKYDIEVE IKAEDIVPTL
TWGTSPQDVV PITGVVPNPD DFPEAQRGNI VRALEYMGLT SGTPMEKVKI DKAFFGSCTN
GRIEDMRSAA RVILASQKNG GPSKVADGVY AMIVPGSGLV KQQAEAEGLD VIFKKAGFDW
REAGCSMCLG MNPDQLKPGE RCASTSNRNF EGRQGAGGRT HLMSPAMVAA ASLTGYLTDV
RTLMGSHAND DGLKITSYFD YLTPVEVPAQ PTEPTEETEE GKTPVKAAAA GSAGLPKFNV
LRGIAAPMWE ANIDTDKIIP KQFLKTLLRT GLGKALFWPL RYDVETNEEI PDFVLNKEPY
RHASIIVCTG PNFGCGSSRE HAPWALNDFG IRCVMAPSFG DIFKTNCFKN GMLPLQLPQA
DLDTLYEDAS AGLEITVDLE NQVIVRPNGK PSIPFSVDPF RRHCLINGLD DIGLTLVHRD
EIEKFEGKRT AVWPWLDGVG YAKKGQKVIA VPVRKGARKT DW
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