| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3469 |
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| Symbol | leuD |
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| ID | 4922471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4153182 |
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| End bp | 4153787 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640165091 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_001095594 |
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| Protein GI | 127514397 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.068645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.363086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACCAT TTACCACACA TACAGGGCTT GCGGTGATCA TCGACAGTGC CAATATCGAT
ACGGATCAGA TCATCCCTAA GCAGTTTCTC TCTAAGGTCA CCCGTGACGG TTTCGGGGTT
CACCTGTTTC ACGACTGGCG TTATCTGGAC GATGCCGGCG ATCAGCCTAA TCCTGAGTTC
AGCCTGAATC GGCCCCGTTA CCAAGGAGCC TCTATCTTGC TGGCTAAGGA GAACTTTGGT
TGTGGCTCGA GTCGTGAACA TGCGCCCTGG GCCCTGGCCG ATTTTGGCCT TAGGGTGATC
ATAGCGCCAA GTTTTGCCGA TATCTTCTAT GGCAACGCCA TCAACAACGG CCTTTTGCCG
GTTCGCCTCA CCGAGGCGGA GGTGGTGCAG TTGATGCGAG AGGTTGAAGC CGAAGAGGGC
GCTCAGGTGA GCGTGGATCT GCAGGCACAG ACTGTGACCT CTCCTTCGGG CGCAAGCTTT
AGCTTCGAAA TCGCCCCGTC GGCACGTCAT AACCTGCTAA ACGGCCTGGA TGCCATAGGC
ATCAGCCTGG GTTACGGCGA GGCGATAGCG GCTTATGAAA CCGAAATCCC CGGCTGGCGG
GCCTAA
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| Protein sequence | MQPFTTHTGL AVIIDSANID TDQIIPKQFL SKVTRDGFGV HLFHDWRYLD DAGDQPNPEF
SLNRPRYQGA SILLAKENFG CGSSREHAPW ALADFGLRVI IAPSFADIFY GNAINNGLLP
VRLTEAEVVQ LMREVEAEEG AQVSVDLQAQ TVTSPSGASF SFEIAPSARH NLLNGLDAIG
ISLGYGEAIA AYETEIPGWR A
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