| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1424 |
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| Symbol | |
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| ID | 5453416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1555215 |
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| End bp | 1555820 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640876997 |
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| Product | 3-isopropylmalate dehydratase, small subunit |
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| Protein accession | YP_001412701 |
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| Protein GI | 154251877 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAAGT TCAACAAGTT GACGGGCGTC GCGGCGCCGC TGCCGATCAT CAATGTCGAT
ACCGACATGA TCATCCCGAA GCAGTTCCTG AAGACGATCA AGCGCACGGG GCTCGGCAAG
AACCTCTTCG ACGAGATGCG CTATGACGAT AATGGCAACG AGATTCCGGA TTTCGTGCTG
AACAAGCCGG CTTACCGGAA CGCGCAGATT CTCGTCACCG GCGAGAATTT CGGCTGCGGT
TCGAGCCGCG AACATGCGCC CTGGGCGCTG CTCGATTTCG GCATCCGCTG CGTGATCGCA
CCGAGCTTCG CCGACATTTT CTACAACAAC TGTTTCCAGA ACGGCATTCT CCCCATCGTC
CTGCCGCAGG AAGAAGTCGA CAAGCTGATG GACGATGCGG AGCGCGGCTC GAACGCGATC
ATCACCGTCG ATCTCGAAGC TCAGGAGATC CGGGGTCCGG ATGGCGGCGT CATCAAGTTC
GACGTCGATC CCTTCCGCAA ACATTGCATG CTGAACGGCC TCGACGGCGT CGGCCTGACG
CTCCAGAAGG AAGCGGAGAT CGCCACCTTC GAAAAGAAAC TCGAAGAAAC GCAGCCCTGG
CTCTGA
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| Protein sequence | MDKFNKLTGV AAPLPIINVD TDMIIPKQFL KTIKRTGLGK NLFDEMRYDD NGNEIPDFVL
NKPAYRNAQI LVTGENFGCG SSREHAPWAL LDFGIRCVIA PSFADIFYNN CFQNGILPIV
LPQEEVDKLM DDAERGSNAI ITVDLEAQEI RGPDGGVIKF DVDPFRKHCM LNGLDGVGLT
LQKEAEIATF EKKLEETQPW L
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