| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0423 |
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| Symbol | |
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| ID | 5773525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 379760 |
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| End bp | 380344 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641316053 |
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| Product | 3-isopropylmalate dehydratase small subunit |
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| Protein accession | YP_001581757 |
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| Protein GI | 161527931 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0497347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACCTT TCAAGAAAAC AACAAGCATT GTAACTCCAC TTGACAAAGT TAATGTTGAT
ACTGATCAGA TCGTACCAAA ACAATTTCTA AAACTAGTAC AAAAGTCTGG ATTTGGAAAA
TTTTTGTTCT TTAACTGGAG ATATGATGAA AATGAAAACC CAAAATCTGA TTTTGTCTTA
AATGACTCAA AATATGATAA CTCTCATATC TTGGTTGCAG GCGACAATTT TGGCTGTGGT
TCTAGTAGGG AGCACGCAGT ATGGGCACTC CAAGACTATG GTTTTTCAGT AATTATTGCC
CCTTCATTTG CTGATATCTT CTTTAGCAAT TGCTTCAAGA ATGGAATCTT GCCAATTTCT
TTAGAGCAAA GTGTTGTTGA GAAACTACAA CAAGAGTCTG AACCGATCGA AGTTGATTTA
GAAAATCAAA TAATCAAAAC ATCTTCAGAT GAAATACATT TTGAGATAGA TTCTCACAAA
AAGAAAATTC TCTTAGAGGG ATTGGATGAT ATTGCACAAA CATATCAATT TGAAGATAAG
ATTTCTGAAT TTGAAAAACA GTCTACAGTC CCATCTGTTT TATGA
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| Protein sequence | MEPFKKTTSI VTPLDKVNVD TDQIVPKQFL KLVQKSGFGK FLFFNWRYDE NENPKSDFVL
NDSKYDNSHI LVAGDNFGCG SSREHAVWAL QDYGFSVIIA PSFADIFFSN CFKNGILPIS
LEQSVVEKLQ QESEPIEVDL ENQIIKTSSD EIHFEIDSHK KKILLEGLDD IAQTYQFEDK
ISEFEKQSTV PSVL
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