Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0414 |
Symbol | leuD |
ID | 7089552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 462316 |
End bp | 462921 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643459334 |
Product | isopropylmalate isomerase small subunit |
Protein accession | YP_002356371 |
Protein GI | 217971620 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000110574 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAACCTT TTACGACCCA TACCGGGCTT GCGGTCATGA TCGACAGCAC CAATATCGAT ACGGATCAGA TCATTCCGAA ACAGTTTTTA TCTAAGGTGA CGCGCGATGG TTTTGGCGTG CACTTATTTC ACGACTGGCG TTATTTAGAT GATGCGGGCG ATCAGCCTAA TCCTGAGTTT TCATTGAATC AAAGCCGTTA TAAAGGCGCG TCGATTCTTT TGGCACAGGA AAACTTTGGT TGTGGTTCAA GCCGCGAACA TGCGCCTTGG GCGCTGGTAG ACTTTGGTCT GCGTGCGATT ATTGCGCCGA GTTTTGCTGA CATTTTTTAC GGTAACTCAA TCAATAACGG CCTATTACCT GTGGCGTTAA CCCACGCGCA GGTGCGCCAA TTAATGGATG AAGTGGCGGC AGAAGCTGGT GCACAAATTA CGGTTGATCT TACAAGCTGC AAAGTGATTT CACCGTCGGG CGCCGAGTTT AGTTTTACGC TGGCAGAATC GGCAAGGCAT AAGTTGCTAA ACGGTTTAGA TGCGATTGGA CTGACCTTGT CCCATGCTGC GCAAATCAGT CAGTACGAAA CCCAAATCCA AGGCTGGCGC CGTTAG
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Protein sequence | MQPFTTHTGL AVMIDSTNID TDQIIPKQFL SKVTRDGFGV HLFHDWRYLD DAGDQPNPEF SLNQSRYKGA SILLAQENFG CGSSREHAPW ALVDFGLRAI IAPSFADIFY GNSINNGLLP VALTHAQVRQ LMDEVAAEAG AQITVDLTSC KVISPSGAEF SFTLAESARH KLLNGLDAIG LTLSHAAQIS QYETQIQGWR R
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