Gene Pden_2522 details

Gene Information

• Locus tag: Pden_2522
• Symbol: leuD
• ID: 4580160
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Paracoccus denitrificans PD1222
• Kingdom: Bacteria
• Replicon accession: NC_008686
• Strand: +
• Start bp: 2538074
• End bp: 2538679
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 639769851
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_916305
• Protein GI: 119385249
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.68534
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACAAGT TCACCACACT GACCGGAATC GCGGCACCCA TGCCGCTGGT CAACATCGAC 
ACCGACATGA TCATCCCGAA ACAGTTCCTG AAGACGATCC ATCGCTCGGG TCTGGGCAAG 
AACCTGTTCG ACGAGATGCG CTACAATCCC GACGGCTCCG AGATCCCCGA TTTCGTGCTG 
AACCAGCCGG CCTACCGGGA ATCGCAGATC ATCGTCGCCG GCGACAACTT CGGCTGCGGT 
TCGTCGCGCG AGCACGCGCC CTGGGCCCTG CTGGATTTCG GCATCCGCTG CGTGATCTCC 
ACCAGCTTCG CCGACATCTT CTACAACAAC TGCTTCAAGA ACGGCATCCT GCCCATCGTC 
ATGCCGCAAG AGGTCGTGGA CGTGCTGATG GAGGACGCGA AGAAGGGCGC CAACGCCCGC 
ATGACCGTCG ATCTGGAAAA CCTGACCGTG ACCACCTCGG ACGGGCAGAG CTTCCCCTTC 
GAGCTGGACC CGTTCCGCCG CCACTGCCTG CTGAACGGTC TGGACGATAT CGGCCTGACC 
ATGGAGAAGG CAGGCGCCAT CGACACCTAT GAGGCGCAGA TGGCCCAGAG CCGGCCTTGG 
GTGTAA 

 

Protein sequence

MDKFTTLTGI AAPMPLVNID TDMIIPKQFL KTIHRSGLGK NLFDEMRYNP DGSEIPDFVL 
NQPAYRESQI IVAGDNFGCG SSREHAPWAL LDFGIRCVIS TSFADIFYNN CFKNGILPIV 
MPQEVVDVLM EDAKKGANAR MTVDLENLTV TTSDGQSFPF ELDPFRRHCL LNGLDDIGLT 
MEKAGAIDTY EAQMAQSRPW V