Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maqu_1564 |
Symbol | leuD |
ID | 4655985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinobacter aquaeolei VT8 |
Kingdom | Bacteria |
Replicon accession | NC_008740 |
Strand | - |
Start bp | 1750243 |
End bp | 1750890 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639811529 |
Product | isopropylmalate isomerase small subunit |
Protein accession | YP_958835 |
Protein GI | 120554484 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.126411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAGCAT TTACGCAACA CCAGGGCACT GTTGCCCCCA TGGACCGTTC CAATGTGGAC ACGGACATGA TTATTCCCAA GCAGTTTTTG AAGTCCATCA AGCGCACGGG CTTTGGCCCG AACCTGTTCG ATGAGCTGCG TTATCTGGAT GAAGGCAAGC CGGATCAGGA TTGCTCCAAC CGCCCCCTGA ATCCGGACTT TGTGCTGAAC CAGGATCGCT ACAAAAACGC CAGCGTGTTG CTGGCGCGGA CCAATTTTGG CTGTGGTTCG AGTCGTGAGC ACGCGCCATG GGCGCTGGAT GATTTCGGTT TCCGGGTGAT TATTGCGCCG AGTTTTGCTG ATATTTTCTA CAACAACTGC TTTAAGAATG GACTTTTACC CATTGTTTTA GATGAAAAAG TGGTTGATAG GCTGTTCCGG GAAACCGAAG AGAATGAAGG CTATCAGCTG ACGGTCGATC TCGAAGCGAA AACGGTGACG ACGCCCGGTG GCGAGTCGTT CAGTTTTGAG GTGGACGATT TCCGTCGTCA TTGCCTGCTG AACGGTCTGG ACGACATCGG CGTGACCCTG GAAGATGCGG ATACCATTCG CGCTTATGAA GAATCCCGGC GCAAGACCGC TCCCTGGTTG TTTAATACTG GAAACTGA
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Protein sequence | MRAFTQHQGT VAPMDRSNVD TDMIIPKQFL KSIKRTGFGP NLFDELRYLD EGKPDQDCSN RPLNPDFVLN QDRYKNASVL LARTNFGCGS SREHAPWALD DFGFRVIIAP SFADIFYNNC FKNGLLPIVL DEKVVDRLFR ETEENEGYQL TVDLEAKTVT TPGGESFSFE VDDFRRHCLL NGLDDIGVTL EDADTIRAYE ESRRKTAPWL FNTGN
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