Gene Shewmr7_0371 details

Gene Information

• Locus tag: Shewmr7_0371
• Symbol: leuD
• ID: 4258576
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. MR-7
• Kingdom: Bacteria
• Replicon accession: NC_008322
• Strand: +
• Start bp: 412634
• End bp: 413239
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 638120976
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_736431
• Protein GI: 114045881
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAACCTT TTACTAGCCA TACCGGGCTT GCGGTCATGA TCGACAGCGC AAATATCGAT 
ACCGATCAAA TTATCCCAAA GCAATTTTTA TCTAAGGTGA CGCGGGATGG ATTCGGTGTG 
CACTTATTCC ACGACTGGCG TTATCTCGAT GATGCCGGGG ATGTGCCTAA TCCTGATTTC 
ACACTAAACA AACCTCGCTA TCGCGGTGCA TCGATTTTGC TGGCTCAGGA AAACTTTGGC 
TGTGGCTCTA GCCGTGAGCA TGCTCCGTGG GCACTGGCGG ATTTTGGCCT GCGCGCCATT 
ATTGCCCCGA GCTTTGCCGA TATTTTTTAT GGCAACTCCA TCAACAACGG TTTGTTGCCG 
GTGAAGCTGA GCGCGAATGA AGTGCGTCAG TTAATGGATG AGGTGGCGAG CGAAGAAGGC 
GCACAAATCA CCGTGGACTT AACGACTTGC AAGGTGATAT CGCCTTCTGG AGCTGAATTT 
AGCTTTACAC TGGCCGAGTC GGCGCGACAT AAATTGCTGA ATGGCTTAGA TGCTATTGGA 
TTGACCTTGT CCCACGGGAC GCAGATAGGT GAGTACGAAG CAAACATTCC TAGCTGGCGC 
CGCTAA 

 

Protein sequence

MQPFTSHTGL AVMIDSANID TDQIIPKQFL SKVTRDGFGV HLFHDWRYLD DAGDVPNPDF 
TLNKPRYRGA SILLAQENFG CGSSREHAPW ALADFGLRAI IAPSFADIFY GNSINNGLLP 
VKLSANEVRQ LMDEVASEEG AQITVDLTTC KVISPSGAEF SFTLAESARH KLLNGLDAIG 
LTLSHGTQIG EYEANIPSWR R