Gene Plim_0321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0321 
Symbol 
ID9136978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp401421 
End bp402032 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content56% 
IMG OID 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_003628371 
Protein GI296120593 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00352929 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCAAG CCATTACTCA AGTGACAGGG TCAGCCGTTC CACTTTTGCT GGATGACATC 
GACACAGATC GCATCATTCC CGCGCGGTTT CTGCGGTGTG TGACCTTCGA CGGCCTGGGC 
GAGCACGCCT TTGAAGATGA CCGGATTCAA GACCCTTCAC ATCCGTTCAA TCAGGCCCAG 
TTTCAAGGTA GCAAGATTCT GGTGGCTGGC CGTAATTTTG GCTGTGGCTC ATCGCGCGAG 
CATGCACCAC AGGCCCTGAT GCGCTGGGGC ATCCAGGCCA TCATTGCCGA ATCGTATGCC 
GAGATTTTCT TCGGGAACTG CGTCTCGCTA GGGATTCCCT GCGTGCGAGC CAGTCGAGCC 
GACCTCGAAG CTTTGACGAA GCTCATCAAT GCAGATCCTC GCACGTCAGT CGCCATCGAT 
CTGCTGGCTC AGACCGTGAC TGCACAATCG GAAAGCGGCC AGCAAGTTAA GGCAACTGTC 
GAGATTCCCC CGGGTGCCAG GCAATCACTG ACCACGGGAG GCTGGGATTT TCTGGGCCAG 
CTGCTGGATG GAGAACCCAA AGTCCGCGCT CAGGTTGCCA GAATCCCTTA CCTGCAGAAG 
TTTGCAGTTT AA
 
Protein sequence
MVQAITQVTG SAVPLLLDDI DTDRIIPARF LRCVTFDGLG EHAFEDDRIQ DPSHPFNQAQ 
FQGSKILVAG RNFGCGSSRE HAPQALMRWG IQAIIAESYA EIFFGNCVSL GIPCVRASRA 
DLEALTKLIN ADPRTSVAID LLAQTVTAQS ESGQQVKATV EIPPGARQSL TTGGWDFLGQ 
LLDGEPKVRA QVARIPYLQK FAV