Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_0862 |
Symbol | leuD |
ID | 3718215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007493 |
Strand | - |
Start bp | 2612799 |
End bp | 2613404 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640072087 |
Product | isopropylmalate isomerase small subunit |
Protein accession | YP_353945 |
Protein GI | 77464441 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGAAT TCACCAAAGT GACCGGTGTC GCGGCCCCCA TGCCGCTCGT CAATATCGAC ACCGACATGA TCATCCCGAA GCAGTTCCTG AAGACGATCC AGCGCTCGGG TCTCGGCAAG AACCTGTTCG ACGAGATGCG CTATAATCCC GACGGCAGCG AGATCCCGGA GTTCGTGCTG AACCAGCCGG CTTATCGCGA TGCGCAGATC ATCGTCGCGG GCGACAATTT CGGCTGCGGC TCGTCGCGCG AACATGCGCC CTGGGCGCTG CTCGACTTCG GCATCCGCTG CGTGATCTCG ACGAGCTTCG CCGACATCTT CTACAACAAC TGCTTCAAGA ACGGCATCCT GCCCATCGTC ATGCCGCCCG AGGTGGTCGA GGTGCTGATG GAGGATGCCC GCCGGGGCGC CAACGCGCGC ATGACTGTCG ATCTCGAGGC GCAGACGGTG ACGACCTCGG ACGGGCAGTC CTTCCCGTTC CAGGTCGATT CGTTCCGCCG TCACTGCCTG ATGAACGGCC TCGACGACAT CGGCCTGACG CTGGAGAAGG CCGCCTCGAT CGACGGGTTC GAACGCGACC TTGCAACCCT GAGACCCTGG GTCTGA
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Protein sequence | MQEFTKVTGV AAPMPLVNID TDMIIPKQFL KTIQRSGLGK NLFDEMRYNP DGSEIPEFVL NQPAYRDAQI IVAGDNFGCG SSREHAPWAL LDFGIRCVIS TSFADIFYNN CFKNGILPIV MPPEVVEVLM EDARRGANAR MTVDLEAQTV TTSDGQSFPF QVDSFRRHCL MNGLDDIGLT LEKAASIDGF ERDLATLRPW V
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