Gene Rsph17025_0159 details

Gene Information

• Locus tag: Rsph17025_0159
• Symbol: leuD
• ID: 5082567
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides ATCC 17025
• Kingdom: Bacteria
• Replicon accession: NC_009428
• Strand: +
• Start bp: 158712
• End bp: 159317
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 640481714
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001166375
• Protein GI: 146276216
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.949563
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACAAAT TTACCAAGCT GACCGGTGTC GCGGCGCCCA TGCCGCTCGT GAACATCGAC 
ACCGACATGA TCATCCCGAA ACAGTTCCTG AAGACGATCC AGCGCTCGGG TCTCGGCAAG 
AACCTGTTCG ACGAGATGCG CTACAATCAG GACGGCACCG AGATCGCCGA CTTCGTGCTG 
AACCAGCCGG CCTATCGGCA GGCCCAGATC ATCGTGGCGG GCGACAACTT CGGCTGCGGC 
TCGTCCCGCG AACACGCGCC CTGGGCGCTT CTGGATTTCG GCATCCGCTG CGTGATCGCG 
ACCAGCTTCG CCGACATCTT CTACAACAAC TGCTTCAAGA ACGGCATCCT GCCCATCGTG 
ATGCCGCCCG AAGTGGTCGC CGTGCTGATG GAGGACGCCC GCAAGGGCGC CAACGCCCGC 
ATGACCGTGG ATCTCGAGGC GCAGACCGTC ACCACCTCGG ACGGGCAGTC CTTCCCGTTC 
CAGGTTGATT CGTTCCGCCG TCACTGCCTG ATGAACGGCC TCGACGACAT CGGTCTGACG 
CTGGAAAAAG TGGCGGCCAT CGACGGCTTC GAAAAGGCGG CCGCAACCTT GAGGCCATGG 
GTCTGA 

 

Protein sequence

MDKFTKLTGV AAPMPLVNID TDMIIPKQFL KTIQRSGLGK NLFDEMRYNQ DGTEIADFVL 
NQPAYRQAQI IVAGDNFGCG SSREHAPWAL LDFGIRCVIA TSFADIFYNN CFKNGILPIV 
MPPEVVAVLM EDARKGANAR MTVDLEAQTV TTSDGQSFPF QVDSFRRHCL MNGLDDIGLT 
LEKVAAIDGF EKAAATLRPW V