Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0076 |
Symbol | leuD |
ID | 6144971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 85482 |
End bp | 86087 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641614977 |
Product | isopropylmalate isomerase small subunit |
Protein accession | YP_001742193 |
Protein GI | 170682967 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.28946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAGA AATTTATCAA ACATACAGGC CTGGTGGTTC CACTGGATGC CGCCAATGTC GATACCGATG CAATCATCCC GAAACAGTTT TTGCAGAAAG TGACCCGTAC GGGTTTTGGC GCGCATCTGT TTAACGACTG GCGTTTTCTG GATGAAAAAG GCCAACAGCC AAACCCGGAC TTCGTGCTGA ACTTCCCGCA GTATCAGGGC GCTTCCATTT TGCTGGCACG AGAAAACTTC GGCTGCGGTT CCTCGCGTGA GCACGCGCCG TGGGCATTGA CCGATTACGG TTTTAAAGTG GTGATTGCAC CGAGTTTTGC TGACATCTTC TACGGCAACA GCTTTAACAA CCAGCTGCTG CCGGTGAAAT TAAGCGATGC AGAAGTGGAT GAGCTGTTTG CGCTAGTGAA AGCCAATCCG GGGATCCATT TCGACGTGGA CCTGGAAGCG CAAGAGGTGA AGGCAGGTGA GAAAACCTAT CGTTTTACCA TCGATGCATT CCGCCGCCAC TGCATGATGA ACGGTCTGGA CAGCATCGGC CTGACTCTGC AGCACGACGA CGCCATTGCG TCTTATGAAG AGAAGCAACC GGCGTTTATG CGTTAG
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Protein sequence | MAEKFIKHTG LVVPLDAANV DTDAIIPKQF LQKVTRTGFG AHLFNDWRFL DEKGQQPNPD FVLNFPQYQG ASILLARENF GCGSSREHAP WALTDYGFKV VIAPSFADIF YGNSFNNQLL PVKLSDAEVD ELFALVKANP GIHFDVDLEA QEVKAGEKTY RFTIDAFRRH CMMNGLDSIG LTLQHDDAIA SYEEKQPAFM R
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