Gene VC0395_A2068 details

Gene Information

• Locus tag: VC0395_A2068
• Symbol: leuD
• ID: 5136223
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 2227581
• End bp: 2228183
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640533525
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001217992
• Protein GI: 147675448
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGGAT TTCAGCAACA CACCGGCTTA GTCGTTCCTC TTGATGCCGC CAACGTCGAT 
ACCGATGCGA TCATTCCAAA GCAGTTTTTG CAAAAAGTGA ATCGCACTGG CTTTGGCAAA 
CATCTGTTCC ACGACTGGCG ATTTTTGGAC GATGCAGGTG AAAAAGCCAA CCCAGAATTT 
GTGATGAACC AACCTCGCTA CCAAGACGCT AGCATTTTGC TCGCAAGAGA GAACTTTGGT 
TGCGGCTCCT CGCGCGAACA CGCCCCTTGG GCATTAGCGG ATTACGGCAT CAGAGTGATG 
ATTGCTCCAA GCTTTGCCGA TATTTTCTAT GGTAACTCGA TCAACAACCA GATGGTGCCC 
GTTCGTTTAA CCGAGCAAGA AGTGGATGAG CTCTTTACCT ATGTTCATGA TACGGAAGGA 
GCAACTATTA CCGTCGATTT AGAAGCGCTG AGCGTAACCG CGAATGGTAA AACCTACCAT 
TTCGAGATTG ACGATTTCCG TCGCCATTGT CTACTTAATG GCTTAGACAA TATCGGCCTG 
ACTCTACAGC ACGAAGCAAA AATTGCGGAG TATGAAGCCA AGATACCGAG CTTCTTAAAA 
TAA 

 

Protein sequence

MSGFQQHTGL VVPLDAANVD TDAIIPKQFL QKVNRTGFGK HLFHDWRFLD DAGEKANPEF 
VMNQPRYQDA SILLARENFG CGSSREHAPW ALADYGIRVM IAPSFADIFY GNSINNQMVP 
VRLTEQEVDE LFTYVHDTEG ATITVDLEAL SVTANGKTYH FEIDDFRRHC LLNGLDNIGL 
TLQHEAKIAE YEAKIPSFLK