| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0215 |
|---|
| Symbol | leuD |
|---|
| ID | 5897489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 229385 |
|---|
| End bp | 229993 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641560699 |
|---|
| Product | isopropylmalate isomerase small subunit |
|---|
| Protein accession | YP_001681850 |
|---|
| Protein GI | 167644187 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
|---|
| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.20437 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCCT TCACCCGTCT CGACGGCCGC GCCGCGCCGC TGTCGCTGGC CAATATCGAC
ACCGACCAGA TCATCCCCAA GCAGTTCCTC AAGACCGTCG AGCGCGAGGG CCTGGCCAAG
GGCCTGTTCT ACGACTTCCG CTATGACGGC GAGGGCAACG AGATCGCCGA CTTCGTGCTC
AATCGGCCGG AGTACAAGGG CGCGTCCGTG CTGATCGCCG GCGACAATTT CGGCTGCGGG
TCGTCGCGAG AGCACGCCCC GTGGGCGCTG ATGGACTACG GGATCATGTG CGTGATCTCG
ACCAGCTTCG CCGACATCTT CAACAACAAC TGCTTTAACA ACGGCCTGCT GCCCGTGGTG
CTGAAGCCCG AGGAGGTCGC CGTCCTGATG GACGAGGCCA AGGGCGGCAA CCACATGGTC
AGCATCGACC TGGCGGAGCA GACGGTGATC TCGCCCTCCG GCAAGAGCTT CCACTTCGAC
ATCGATCCGG TTCGCAAGGA CAAGATGCTC AAGGGCCTGG ACTTCATCGG CGAGACGCTG
ATGCACGGCG GCGACATCGA CGTGTACGAA AGCAAGCGCG CGTTGGACCG GCCGTGGCTG
GAGGCTTGA
|
|---|
| Protein sequence | MQAFTRLDGR AAPLSLANID TDQIIPKQFL KTVEREGLAK GLFYDFRYDG EGNEIADFVL
NRPEYKGASV LIAGDNFGCG SSREHAPWAL MDYGIMCVIS TSFADIFNNN CFNNGLLPVV
LKPEEVAVLM DEAKGGNHMV SIDLAEQTVI SPSGKSFHFD IDPVRKDKML KGLDFIGETL
MHGGDIDVYE SKRALDRPWL EA
|
|---|
| |