Gene Spea_3825 details

Gene Information

• Locus tag: Spea_3825
• Symbol: leuD
• ID: 5664209
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 4650323
• End bp: 4650928
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641238489
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001503670
• Protein GI: 157963636
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACCAT TTATCTCACA TACAGGGCTT GCGGTTATCA TAGATAGTGC AAACGTGGAT 
ACCGATCAGA TCATCCCTAA GCAGTTTCTT TCTAAGGTGA CGCGTGACGG CTTTGGTGTT 
CACCTTTTTC ACGATTGGCG CTATTTAGAT GACGCTGGCG ATCAACTTAA TCCAGACTTT 
ACTCTGAATA AGCCTCGCTA TCAGGGCGCT TCTATTCTTG TGTCTCAAGA AAACTTTGGC 
TGTGGTTCGA GTCGAGAGCA TGCGCCATGG GCGTTGGCCG ATTTTGGCTT AAAAGTGATT 
ATTGCCCCGA GCTTTGCCGA TATCTTTTAT GGTAACTCAA TTAATAATGG CTTATTGCCT 
GTTAGGTTAG CTGACGCCGA AGTTAAACAG CTTATGGCTG AGGTTGAGGC TAAAGAGGGA 
GCGGAGATCA GTGTTGATCT TCAAGCTTTA ACTGTGACGA GCCCGTCAGG CTCTCAATTC 
CATTTTGAAA TTGCCCAATC GGCAAGGCAT AACTTATTAA ATGGGTTAGA TGCAATTGGT 
CTGACACTGT CACATGCCGA TACGATTGCT AATTATGAAG CTAACATTCC ATCTTGGAGA 
CGCTAA 

 

Protein sequence

MQPFISHTGL AVIIDSANVD TDQIIPKQFL SKVTRDGFGV HLFHDWRYLD DAGDQLNPDF 
TLNKPRYQGA SILVSQENFG CGSSREHAPW ALADFGLKVI IAPSFADIFY GNSINNGLLP 
VRLADAEVKQ LMAEVEAKEG AEISVDLQAL TVTSPSGSQF HFEIAQSARH NLLNGLDAIG 
LTLSHADTIA NYEANIPSWR R