Gene Sputcn32_0474 details

Gene Information

• Locus tag: Sputcn32_0474
• Symbol: leuD
• ID: 5080729
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 509876
• End bp: 510481
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640497594
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001182005
• Protein GI: 146291581
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACCTT TTACGACCCA TACCGGGCTT GCGGTCATGA TCGACAGCAC CAATATCGAT 
ACGGATCAGA TCATTCCGAA ACAGTTTTTG TCTAAAGTGA CGCGCGATGG TTTTGGCGTG 
CACTTATTTC ATGACTGGCG TTATTTAGAT GATGCGGGCG ATGTGCCCAA TCCTGAGTTT 
TCATTGAACC AGCCTCGTTA TAAAGGCGCT TCAATTCTTG TGTCGCAGGA AAACTTTGGT 
TGTGGTTCAA GCCGCGAACA TGCGCCTTGG GCGCTGGCGG ACTTTGGTTT GCGCGCCATT 
ATAGCGCCGA GTTTTGCCGA CATTTTTTAC GGCAACTCAA TCAATAATGG CCTATTGCCT 
GTGGCGTTAA CCCATGCGCA GGTGCGTCAG TTGATGGATG AAGTGGCGGC AGAAGAAGGT 
GCGCAAATCA CGGTCGATCT CACAAGCTGT AAAGTGATTT CACCGTCAGG TGCCGAGTTT 
AGTTTTACGC TGGCAGAGTC GGCGAGACAT AAGTTACTCA ATGGGTTAGA TGCCATTGGG 
CTGACCTTGT CCCATGCTGC GCAAATCAGT CAGTACGAAA CCCAAATCCA AGGCTGGCGG 
AGTTAA 

 

Protein sequence

MQPFTTHTGL AVMIDSTNID TDQIIPKQFL SKVTRDGFGV HLFHDWRYLD DAGDVPNPEF 
SLNQPRYKGA SILVSQENFG CGSSREHAPW ALADFGLRAI IAPSFADIFY GNSINNGLLP 
VALTHAQVRQ LMDEVAAEEG AQITVDLTSC KVISPSGAEF SFTLAESARH KLLNGLDAIG 
LTLSHAAQIS QYETQIQGWR S