More than 300 homologs were found in PanDaTox collection
for query gene Gbro_2893 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_2893  response regulator receiver  100 
 
 
206 aa  410  1e-114  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  75.53 
 
 
229 aa  295  4e-79  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  74.21 
 
 
210 aa  290  8e-78  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  74.21 
 
 
210 aa  290  8e-78  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  74.47 
 
 
210 aa  289  2e-77  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  75 
 
 
213 aa  289  2e-77  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  72.77 
 
 
205 aa  285  4e-76  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  69.73 
 
 
205 aa  273  1.0000000000000001e-72  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  69.52 
 
 
200 aa  268  5e-71  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  66.84 
 
 
204 aa  265  4e-70  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1181  response regulator receiver  66.67 
 
 
207 aa  259  2e-68  Thermobifida fusca YX  Bacteria  normal  0.928438  n/a   
 
 
-
 
NC_013595  Sros_2955  response regulator  65.43 
 
 
199 aa  258  4e-68  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  64.4 
 
 
194 aa  256  2e-67  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_014210  Ndas_3159  response regulator receiver and ANTAR domain protein  63.49 
 
 
212 aa  251  5.000000000000001e-66  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  59.69 
 
 
201 aa  250  1e-65  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  61.41 
 
 
201 aa  249  2e-65  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  61.83 
 
 
197 aa  249  3e-65  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  63.24 
 
 
214 aa  246  1e-64  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  63.68 
 
 
206 aa  245  4e-64  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  63.68 
 
 
206 aa  244  4.9999999999999997e-64  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_012669  Bcav_2208  response regulator receiver and ANTAR domain protein  57.29 
 
 
220 aa  243  9.999999999999999e-64  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  58.21 
 
 
229 aa  241  3.9999999999999997e-63  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  60.64 
 
 
220 aa  236  2e-61  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  58.33 
 
 
227 aa  236  2e-61  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  56.16 
 
 
229 aa  236  2e-61  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_013131  Caci_5687  response regulator receiver and ANTAR domain protein  60.87 
 
 
210 aa  234  5.0000000000000005e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  62.84 
 
 
200 aa  234  7e-61  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  58.82 
 
 
226 aa  233  1.0000000000000001e-60  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  60.96 
 
 
207 aa  233  1.0000000000000001e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_012803  Mlut_11030  response regulator with putative antiterminator output domain  61.29 
 
 
198 aa  232  3e-60  Micrococcus luteus NCTC 2665  Bacteria  normal  0.241703  n/a   
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  58.6 
 
 
199 aa  231  7.000000000000001e-60  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  57.53 
 
 
199 aa  228  6e-59  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  61.11 
 
 
247 aa  228  7e-59  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3018  response regulator receiver  65.03 
 
 
207 aa  226  2e-58  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  57.37 
 
 
215 aa  224  5.0000000000000005e-58  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  51.65 
 
 
197 aa  214  7e-55  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  51.65 
 
 
191 aa  197  7.999999999999999e-50  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  47.09 
 
 
194 aa  191  6e-48  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_12950  response regulator with putative antiterminator output domain  47.85 
 
 
189 aa  190  1e-47  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.22629  normal  0.269406 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  47.62 
 
 
194 aa  190  1e-47  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_013721  HMPREF0424_0616  response regulator receiver domain protein  48.02 
 
 
249 aa  189  4e-47  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_0739  putative response regulator  48.51 
 
 
261 aa  187  1e-46  Bifidobacterium longum DJO10A  Bacteria  hitchhiker  0.000540248  n/a   
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  48.35 
 
 
195 aa  184  6e-46  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  47.31 
 
 
196 aa  181  6e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  47.54 
 
 
196 aa  181  7e-45  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_1081  response regulator receiver and ANTAR domain protein  46.03 
 
 
203 aa  171  9e-42  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2517  response regulator receiver and ANTAR domain protein  46.74 
 
 
194 aa  167  1e-40  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  46.24 
 
 
194 aa  166  2e-40  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_002939  GSU2822  response regulator  41.27 
 
 
191 aa  162  3e-39  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1051  response regulator receiver and ANTAR domain protein  40.76 
 
 
192 aa  161  8.000000000000001e-39  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  40.1 
 
 
202 aa  160  1e-38  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_008261  CPF_0888  response regulator  37.91 
 
 
191 aa  157  1e-37  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  41.53 
 
 
198 aa  156  2e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  42.02 
 
 
194 aa  155  4e-37  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  41.53 
 
 
188 aa  150  8.999999999999999e-36  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_013235  Namu_2394  response regulator receiver and ANTAR domain protein  45.41 
 
 
218 aa  149  3e-35  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00108275  hitchhiker  0.000509226 
 
 
-
 
NC_010003  Pmob_0297  response regulator receiver/ANTAR domain-containing protein  38.8 
 
 
195 aa  147  1.0000000000000001e-34  Petrotoga mobilis SJ95  Bacteria  normal  0.719259  n/a   
 
 
-
 
NC_007498  Pcar_2091  response regulator  42.39 
 
 
187 aa  147  1.0000000000000001e-34  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  37.91 
 
 
208 aa  145  6e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_008609  Ppro_3459  response regulator receiver/ANTAR domain-containing protein  36.95 
 
 
205 aa  144  8.000000000000001e-34  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  43.16 
 
 
198 aa  142  3e-33  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_009253  Dred_2808  response regulator receiver/ANTAR domain-containing protein  39.56 
 
 
220 aa  141  6e-33  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00041222  n/a   
 
 
-
 
NC_013216  Dtox_3764  response regulator receiver and ANTAR domain protein  38.38 
 
 
194 aa  141  6e-33  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0425638  normal 
 
 
-
 
NC_009253  Dred_1289  response regulator receiver/ANTAR domain-containing protein  41.21 
 
 
221 aa  140  9.999999999999999e-33  Desulfotomaculum reducens MI-1  Bacteria  normal  0.132207  n/a   
 
 
-
 
NC_013517  Sterm_0084  response regulator receiver and ANTAR domain protein  37.5 
 
 
242 aa  139  3.9999999999999997e-32  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.682854  n/a   
 
 
-
 
NC_010424  Daud_2028  response regulator receiver/ANTAR domain-containing protein  36.9 
 
 
192 aa  132  3e-30  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000049817  n/a   
 
 
-
 
NC_013235  Namu_0678  response regulator receiver and ANTAR domain protein  40.68 
 
 
243 aa  128  7.000000000000001e-29  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1293  response regulator receiver protein  46.83 
 
 
159 aa  117  9.999999999999999e-26  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2177  response regulator receiver/ANTAR domain-containing protein  31.18 
 
 
190 aa  116  1.9999999999999998e-25  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2864  Fis family transcriptional regulator  34.62 
 
 
191 aa  113  2.0000000000000002e-24  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000561884  n/a   
 
 
-
 
NC_010424  Daud_2031  response regulator receiver/ANTAR domain-containing protein  36.56 
 
 
198 aa  112  3e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.00000000027462  n/a   
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  40.56 
 
 
207 aa  111  8.000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  40 
 
 
195 aa  109  3e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_002977  MCA0588  response regulator NasT  35.36 
 
 
191 aa  107  1e-22  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_009253  Dred_2811  response regulator receiver/ANTAR domain-containing protein  31.02 
 
 
191 aa  107  1e-22  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00444481  n/a   
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  36.16 
 
 
196 aa  107  1e-22  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_0963  response regulator receiver and ANTAR domain protein  34.24 
 
 
191 aa  106  2e-22  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000231614  normal 
 
 
-
 
NC_009654  Mmwyl1_2821  response regulator receiver/ANTAR domain-containing protein  32.73 
 
 
224 aa  102  3e-21  Marinomonas sp. MWYL1  Bacteria  normal  0.41961  normal  0.477248 
 
 
-
 
NC_011988  Avi_5900  two component response regulator  34.46 
 
 
195 aa  102  5e-21  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_3768  response regulator receiver and ANTAR domain protein  30.6 
 
 
195 aa  100  2e-20  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  29.53 
 
 
195 aa  100  2e-20  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2319  response regulator receiver and ANTAR domain protein  34.25 
 
 
206 aa  98.6  5e-20  Acidovorax ebreus TPSY  Bacteria  normal  0.781459  n/a   
 
 
-
 
NC_008782  Ajs_2830  response regulator receiver/ANTAR domain-containing protein  34.25 
 
 
206 aa  98.6  5e-20  Acidovorax sp. JS42  Bacteria  normal  normal  0.264074 
 
 
-
 
NC_012029  Hlac_2561  response regulator receiver protein  47.46 
 
 
118 aa  97.1  2e-19  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.221839  normal 
 
 
-
 
NC_007484  Noc_1494  response regulator  31.35 
 
 
194 aa  95.1  6e-19  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.621557  n/a   
 
 
-
 
NC_012034  Athe_0569  response regulator receiver and ANTAR domain protein  33.53 
 
 
194 aa  94.7  8e-19  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000937079  n/a   
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  28.81 
 
 
196 aa  94.7  9e-19  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1248  response regulator receiver protein  39.82 
 
 
118 aa  93.6  2e-18  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_10620  response regulator receiver protein  45.79 
 
 
122 aa  94  2e-18  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00212992  n/a   
 
 
-
 
NC_010172  Mext_4498  ANTAR domain-containing protein  32.16 
 
 
195 aa  92.8  3e-18  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3266  response regulator receiver/ANTAR domain-containing protein  32.3 
 
 
210 aa  92.4  4e-18  Polaromonas sp. JS666  Bacteria  normal  0.559806  normal 
 
 
-
 
NC_008825  Mpe_A1393  putative response regulator transcription regulator protein  31.32 
 
 
210 aa  92.4  4e-18  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.40238 
 
 
-
 
NC_011884  Cyan7425_3178  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  40.83 
 
 
426 aa  92  5e-18  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0985  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  35.38 
 
 
704 aa  92  6e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000494124  n/a   
 
 
-
 
NC_011757  Mchl_4961  response regulator receiver and ANTAR domain protein  32.16 
 
 
195 aa  91.7  7e-18  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.044252 
 
 
-
 
NC_010718  Nther_1407  response regulator receiver protein  42.02 
 
 
120 aa  91.7  8e-18  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.926591  normal 
 
 
-
 
NC_009511  Swit_1703  response regulator receiver/ANTAR domain-containing protein  31.49 
 
 
193 aa  90.9  1e-17  Sphingomonas wittichii RW1  Bacteria  normal  0.242071  normal 
 
 
-
 
NC_010725  Mpop_5014  response regulator receiver and ANTAR domain protein  31.33 
 
 
195 aa  90.5  1e-17  Methylobacterium populi BJ001  Bacteria  normal  normal  0.757534 
 
 
-
 
NC_010424  Daud_1738  response regulator receiver protein  40.83 
 
 
122 aa  90.5  2e-17  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1415  response regulator receiver/ANTAR domain-containing protein  31.68 
 
 
210 aa  90.1  2e-17  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.609776  normal  0.778661 
 
 
-
 
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