Gene Hlac_2561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2561 
Symbol 
ID7399786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2537587 
End bp2537943 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content61% 
IMG OID643709633 
Productresponse regulator receiver protein 
Protein accessionYP_002567203 
Protein GI222480966 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.221839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGC GCGTGCTTAT CGCGGACGAT TCGGAGTTCA TGCGGAACCT GCTCCGGGAG 
ATACTCGAAG GGGAGTTCGA GATCGTCGGC GAGGCCGAAA ACGGCGTTGA GGCGGTCAAT
ATGTACGAGG AACACGGTCC CGATCTCGTG ATGATGGACA TCGTGATGCC GATCCGCGAC
GGCATCGAGG CGACGACGGA GATCCTCGAA ACGAACCCGG AGGCGACGGT GATCATGTGC
ACCAGTGTCG GGCAAGAGGA GAAGATGAAG GCGGCCATCA AGGCCGGCGC CGAGGGGTAC
ATCACGAAGC CGTTCCAGAA GCCGAACGTG CTCGACGCCA TCGGATCGGC GGTATAA
 
Protein sequence
MATRVLIADD SEFMRNLLRE ILEGEFEIVG EAENGVEAVN MYEEHGPDLV MMDIVMPIRD 
GIEATTEILE TNPEATVIMC TSVGQEEKMK AAIKAGAEGY ITKPFQKPNV LDAIGSAV