More than 300 homologs were found in PanDaTox collection
for query gene Dvul_1201 on replicon NC_008751
Organism: Desulfovibrio vulgaris DP4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008751  Dvul_1201  response regulator receiver protein  100 
 
 
135 aa  271  3e-72  Desulfovibrio vulgaris DP4  Bacteria  normal  0.0883705  hitchhiker  0.00883957 
 
 
-
 
NC_011769  DvMF_0626  response regulator receiver protein  46.49 
 
 
128 aa  84.3  5e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0991172 
 
 
-
 
NC_007519  Dde_0221  response regulator receiver domain-containing protein  42.98 
 
 
118 aa  83.2  0.000000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2257  response regulator receiver protein  38.1 
 
 
120 aa  77  0.00000000000009  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2719  response regulator receiver protein  30.89 
 
 
142 aa  74.7  0.0000000000004  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.617775 
 
 
-
 
NC_013223  Dret_0870  response regulator receiver protein  33.33 
 
 
117 aa  73.9  0.0000000000007  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.226165  normal  0.635424 
 
 
-
 
NC_011769  DvMF_2551  response regulator receiver protein  30.97 
 
 
322 aa  72  0.000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_3714  response regulator receiver domain-containing protein  28.07 
 
 
131 aa  67  0.00000000008  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1235  multi-sensor hybrid histidine kinase  41.12 
 
 
989 aa  64.3  0.0000000005  Burkholderia ambifaria MC40-6  Bacteria  normal  0.172784  normal 
 
 
-
 
NC_013173  Dbac_0575  response regulator receiver protein  32.93 
 
 
117 aa  63.2  0.000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1817  response regulator receiver domain-containing protein  35.42 
 
 
121 aa  62  0.000000003  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.202035 
 
 
-
 
NC_009972  Haur_1220  response regulator receiver protein  34.19 
 
 
130 aa  61.2  0.000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4529  multi-sensor hybrid histidine kinase  38.66 
 
 
989 aa  60.5  0.000000007  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4432  PAS/PAC sensor hybrid histidine kinase  37.04 
 
 
1002 aa  60.1  0.00000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2937  two component transcriptional regulator, winged helix family  37.5 
 
 
243 aa  59.7  0.00000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3713  response regulator receiver domain-containing protein  29.37 
 
 
153 aa  59.7  0.00000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2411  response regulator receiver protein  32.74 
 
 
138 aa  60.1  0.00000001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.133639  normal  0.234327 
 
 
-
 
NC_012848  Rleg_5109  GAF sensor hybrid histidine kinase  30.77 
 
 
2099 aa  59.7  0.00000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0669819 
 
 
-
 
NC_011769  DvMF_2592  two component transcriptional regulator, Fis family  32.46 
 
 
128 aa  60.1  0.00000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013757  Gobs_4657  two component transcriptional regulator, winged helix family  42.35 
 
 
240 aa  59.3  0.00000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3829  response regulator receiver protein  33.33 
 
 
713 aa  59.3  0.00000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0106552  n/a   
 
 
-
 
NC_007760  Adeh_3688  response regulator receiver domain-containing protein  33.33 
 
 
718 aa  59.3  0.00000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0497  response regulator receiver protein  35.42 
 
 
124 aa  58.9  0.00000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.41839  hitchhiker  0.0000227207 
 
 
-
 
NC_011145  AnaeK_3746  response regulator receiver protein  33.33 
 
 
714 aa  58.9  0.00000002  Anaeromyxobacter sp. K  Bacteria  normal  0.374039  n/a   
 
 
-
 
NC_009675  Anae109_2352  response regulator receiver sensor signal transduction histidine kinase  39.47 
 
 
418 aa  58.5  0.00000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.156981  normal  0.116612 
 
 
-
 
NC_011145  AnaeK_0824  response regulator receiver protein  34.19 
 
 
122 aa  58.5  0.00000003  Anaeromyxobacter sp. K  Bacteria  normal  0.0263767  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  40.26 
 
 
231 aa  58.5  0.00000003  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3814  response regulator receiver protein  33.33 
 
 
735 aa  58.2  0.00000004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.706947  hitchhiker  0.0056347 
 
 
-
 
NC_011891  A2cp1_0828  response regulator receiver protein  34.19 
 
 
122 aa  58.2  0.00000004  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  hitchhiker  0.0000089442  n/a   
 
 
-
 
NC_009092  Shew_2749  two component transcriptional regulator  37.66 
 
 
241 aa  58.2  0.00000004  Shewanella loihica PV-4  Bacteria  decreased coverage  0.00000593879  unclonable  0.00000330773 
 
 
-
 
NC_007948  Bpro_0212  multi-sensor hybrid histidine kinase  37.11 
 
 
953 aa  58.2  0.00000004  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4410  response regulator receiver protein  29.91 
 
 
128 aa  58.2  0.00000004  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_0135  integral membrane sensor hybrid histidine kinase  40.51 
 
 
858 aa  57.8  0.00000005  Halothiobacillus neapolitanus c2  Bacteria  normal  0.711395  n/a   
 
 
-
 
NC_011901  Tgr7_2472  response regulator receiver protein  37.8 
 
 
216 aa  57.8  0.00000005  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4099  histidine kinase  34.09 
 
 
600 aa  57.8  0.00000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.056511  decreased coverage  0.000691518 
 
 
-
 
NC_007958  RPD_1666  ATP-binding region, ATPase-like  36.47 
 
 
1427 aa  57.4  0.00000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.207779 
 
 
-
 
NC_010571  Oter_1719  histidine kinase  35.35 
 
 
1257 aa  57.4  0.00000006  Opitutus terrae PB90-1  Bacteria  normal  0.0583268  normal  0.402469 
 
 
-
 
NC_008751  Dvul_2459  multi-sensor signal transduction histidine kinase  41.76 
 
 
489 aa  57.4  0.00000006  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.854352 
 
 
-
 
NC_013525  Tter_0790  two component, sigma54 specific, transcriptional regulator, Fis family  37.68 
 
 
466 aa  57.4  0.00000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007760  Adeh_0600  response regulator receiver (CheY-like) modulated CheB methylesterase  42.68 
 
 
349 aa  57.4  0.00000007  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0090  two component transcriptional regulator, winged helix family  37.5 
 
 
228 aa  57.4  0.00000007  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0634  response regulator receiver modulated CheB methylesterase  42.68 
 
 
349 aa  57.4  0.00000007  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0644  response regulator receiver modulated CheB methylesterase  38.55 
 
 
358 aa  57  0.00000009  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.173945  normal 
 
 
-
 
NC_007908  Rfer_3704  response regulator receiver domain-containing protein  29.51 
 
 
129 aa  57  0.00000009  Rhodoferax ferrireducens T118  Bacteria  normal  0.600519  n/a   
 
 
-
 
NC_013440  Hoch_3814  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  31.63 
 
 
1131 aa  57  0.00000009  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.257486 
 
 
-
 
NC_013223  Dret_0869  response regulator receiver protein  31 
 
 
119 aa  57  0.00000009  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.588002  normal  0.840358 
 
 
-
 
NC_010581  Bind_3546  two component transcriptional regulator  40.96 
 
 
273 aa  57  0.00000009  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.376665  normal  0.686762 
 
 
-
 
NC_013595  Sros_4916  response regulator receiver protein  41.1 
 
 
233 aa  57  0.00000009  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A1052  sensory transduction histidine kinase  32.94 
 
 
1046 aa  56.2  0.0000001  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_011368  Rleg2_5393  GAF sensor hybrid histidine kinase  28.7 
 
 
2099 aa  56.2  0.0000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0480029  normal  0.0859175 
 
 
-
 
NC_007413  Ava_1498  two component transcriptional regulator  36.36 
 
 
247 aa  56.6  0.0000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.220919  normal 
 
 
-
 
NC_012918  GM21_2194  response regulator receiver sensor signal transduction histidine kinase  37.66 
 
 
452 aa  56.2  0.0000001  Geobacter sp. M21  Bacteria  n/a    normal  0.514859 
 
 
-
 
NC_007778  RPB_3818  PAS/PAC sensor hybrid histidine kinase  38.2 
 
 
1426 aa  56.6  0.0000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4908  response regulator receiver protein  37.5 
 
 
130 aa  56.6  0.0000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00100675  n/a   
 
 
-
 
NC_009901  Spea_2969  two component transcriptional regulator  37.66 
 
 
229 aa  56.6  0.0000001  Shewanella pealeana ATCC 700345  Bacteria  decreased coverage  0.000000855765  n/a   
 
 
-
 
NC_009439  Pmen_4313  multi-sensor hybrid histidine kinase  39.51 
 
 
965 aa  56.2  0.0000001  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.975749 
 
 
-
 
NC_011662  Tmz1t_0227  two component transcriptional regulator PhoB, winged helix family  39.74 
 
 
236 aa  56.6  0.0000001  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5118  CheA signal transduction histidine kinase  33.98 
 
 
707 aa  55.5  0.0000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.179318  normal  0.034812 
 
 
-
 
NC_010087  Bmul_5538  PAS/PAC sensor hybrid histidine kinase  37.08 
 
 
760 aa  55.8  0.0000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00762207 
 
 
-
 
NC_007298  Daro_1445  two component LuxR family transcriptional regulator  40.74 
 
 
308 aa  55.8  0.0000002  Dechloromonas aromatica RCB  Bacteria  normal  0.446624  normal 
 
 
-
 
NC_011831  Cagg_0599  response regulator receiver modulated diguanylate cyclase  37.66 
 
 
313 aa  55.8  0.0000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.464892  normal  0.548622 
 
 
-
 
NC_013595  Sros_1560  response regulator receiver protein  38.46 
 
 
129 aa  56.2  0.0000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_0625  response regulator receiver modulated CheB methylesterase  41.46 
 
 
349 aa  55.5  0.0000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.291443  n/a   
 
 
-
 
NC_007577  PMT9312_0130  two component transcriptional regulator  34.09 
 
 
260 aa  55.5  0.0000002  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.907894  n/a   
 
 
-
 
NC_014248  Aazo_5207  winged helix family two component transcriptional regulator  40.26 
 
 
247 aa  56.2  0.0000002  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2025  response regulator receiver sensor signal transduction histidine kinase  37.66 
 
 
452 aa  55.5  0.0000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2092  response regulator receiver protein  32.48 
 
 
298 aa  55.5  0.0000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.748601  normal 
 
 
-
 
NC_009767  Rcas_1504  two component transcriptional regulator  39.24 
 
 
231 aa  55.8  0.0000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.263867  normal  0.57819 
 
 
-
 
NC_010571  Oter_3794  response regulator receiver sensor signal transduction histidine kinase  39.47 
 
 
376 aa  55.5  0.0000002  Opitutus terrae PB90-1  Bacteria  normal  0.0277983  normal  0.543799 
 
 
-
 
NC_013440  Hoch_3278  signal transduction histidine kinase with CheB and CheR activity  39.53 
 
 
2468 aa  55.5  0.0000002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0267066 
 
 
-
 
NC_008816  A9601_01451  two-component response regulator  34.09 
 
 
260 aa  55.5  0.0000002  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.480778  n/a   
 
 
-
 
NC_009972  Haur_4308  response regulator receiver modulated diguanylate cyclase  35 
 
 
552 aa  55.5  0.0000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0671  two component LuxR family transcriptional regulator  35.87 
 
 
333 aa  55.8  0.0000002  Methylibium petroleiphilum PM1  Bacteria  normal  0.0205263  normal 
 
 
-
 
NC_010172  Mext_4217  PAS sensor protein  37.66 
 
 
792 aa  55.5  0.0000003  Methylobacterium extorquens PA1  Bacteria  normal  0.423052  normal  0.639944 
 
 
-
 
NC_009767  Rcas_3136  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  38.27 
 
 
919 aa  55.1  0.0000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4587  PAS/PAC sensor hybrid histidine kinase  37.66 
 
 
803 aa  55.5  0.0000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0699795  normal  0.0670662 
 
 
-
 
NC_012850  Rleg_0329  response regulator receiver protein  26.27 
 
 
121 aa  55.1  0.0000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.629137 
 
 
-
 
NC_011831  Cagg_1597  adenylate/guanylate cyclase with GAF sensor(s)  32.61 
 
 
981 aa  55.5  0.0000003  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000711164  normal 
 
 
-
 
NC_011891  A2cp1_2397  response regulator receiver modulated diguanylate cyclase  38.89 
 
 
434 aa  55.1  0.0000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.593336  n/a   
 
 
-
 
NC_009091  P9301_01471  two-component response regulator  34.09 
 
 
260 aa  55.5  0.0000003  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.37604  n/a   
 
 
-
 
NC_008709  Ping_1745  two component, sigma54 specific, transcriptional regulator, Fis family protein  32.97 
 
 
468 aa  55.1  0.0000003  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4734  PAS/PAC sensor hybrid histidine kinase  37.66 
 
 
798 aa  55.1  0.0000003  Methylobacterium populi BJ001  Bacteria  normal  hitchhiker  0.00660973 
 
 
-
 
NC_008817  P9515_01981  two-component response regulator  33.73 
 
 
242 aa  55.5  0.0000003  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.125891  n/a   
 
 
-
 
NC_007604  Synpcc7942_1873  two component transcriptional regulator  31.62 
 
 
226 aa  55.1  0.0000004  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0961  integral membrane sensor hybrid histidine kinase  35.45 
 
 
1154 aa  55.1  0.0000004  Marinomonas sp. MWYL1  Bacteria  normal  0.544458  normal 
 
 
-
 
NC_009976  P9211_01871  two-component response regulator  35.42 
 
 
242 aa  54.7  0.0000004  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2814  response regulator receiver protein  29.41 
 
 
124 aa  54.7  0.0000004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.212392  normal  0.180632 
 
 
-
 
NC_011369  Rleg2_0297  response regulator receiver protein  26.27 
 
 
121 aa  54.7  0.0000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.127858  normal  0.448356 
 
 
-
 
NC_011145  AnaeK_2309  response regulator receiver modulated diguanylate cyclase  38.89 
 
 
434 aa  55.1  0.0000004  Anaeromyxobacter sp. K  Bacteria  normal  0.484645  n/a   
 
 
-
 
NC_008554  Sfum_3211  response regulator receiver sensor signal transduction histidine kinase  39.08 
 
 
394 aa  54.7  0.0000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008817  P9515_01561  two-component response regulator  34.09 
 
 
260 aa  55.1  0.0000004  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.22181  n/a   
 
 
-
 
NC_013216  Dtox_1554  two component transcriptional regulator, winged helix family  35.44 
 
 
229 aa  54.3  0.0000005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.00709514 
 
 
-
 
NC_009456  VC0395_0147  chemotaxis protein CheY  27.35 
 
 
119 aa  54.7  0.0000005  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0494  CheA signal transduction histidine kinases  36.36 
 
 
798 aa  54.7  0.0000005  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_013422  Hneap_2080  two component, sigma54 specific, transcriptional regulator, Fis family  38.54 
 
 
461 aa  54.7  0.0000005  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_3090  response regulator receiver protein  27.35 
 
 
128 aa  54.3  0.0000005  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0600  CheA signal transduction histidine kinase  36.14 
 
 
706 aa  54.3  0.0000005  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_4937  two component transcriptional regulator  36.36 
 
 
257 aa  54.3  0.0000005  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.565868 
 
 
-
 
NC_011725  BCB4264_A3169  regulatory protein VanR  41.94 
 
 
229 aa  54.3  0.0000005  Bacillus cereus B4264  Bacteria  normal  0.16404  n/a   
 
 
-
 
NC_011729  PCC7424_3637  two component transcriptional regulator, winged helix family  34.09 
 
 
246 aa  54.3  0.0000005  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
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