Gene Mpop_4734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4734 
Symbol 
ID6314055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5057984 
End bp5060380 
Gene Length2397 bp 
Protein Length798 aa 
Translation table11 
GC content70% 
IMG OID642653413 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_001927365 
Protein GI188583920 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00660973 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGGGAG ACATCACGGT GACCGTACAG GACGGGAAGG TGCCGGCCAC CGGGCCGACC 
ATGGCGGATT TCCGCAACCT CGCCGACGCG CTGCCGCAGC TCGCCTGGAT CGCCGAGGCC
GACGGCAACC TCGTCTGGTA CAATCGCCGC TGGTACGACT ACACCGGCAC GACACCGGCC
GAGATGGCCG ATCACGGCTG GCGCAAGCTG CACCACCCGG ACCATCTCGA GCGCGCGGCG
GCCCGCTTCG CCGCCTGCAT CGCGGCGGGC GAATCCTGGC AGGACACGTT TCCGCTCCGG
GGCAAGGACG GCCGCTACCG CTGGTTCCTG TCGCTCGCCG AGCCGGTCCG CAACGCCGAC
GGCGTCATCG TGCGCTGGTA CGGCACCAAC ACCGACGTCA CCGAGACCCG CCTCGCCCAG
GACGCGCTGG GCCATTCCGA GCAGCGCTTC CGGGCGCTGG TGGATGCCTC CGCCGCCGTG
ATCTGGAACA CCACCGCGCA GGGCGAGCTG ATGCCGCCCC AGCCGCGCTG GGCCGCCTAT
ACCGGCCAGG GTGAGGAGGC CTACCAGGGC TGGGGCTGGG TCGATGCCGT CCATCCCGAC
GACCGCGCGC GGGCCGCCGA GGTCTGGGCC GAGTGCGTCG AGGCGGTGAA GGTCTACGAG
GTCGAGTACC GCTTGCGCCG CTACGACGGG GTCTGGCGCG ACATGGAGGT GCGCGGCGTG
CCGGTGCTCG CCGAGGACGG CACCATCCGC GAATGGGTCG GGCTCAACAT CGACATCACC
GCCCGCAAGG AAGCCGAGGC CGCGATCGAG CAGGCCCGCG CCGCGGCGGA AGCCGCCAAC
CTCGCCAAAA GCCAGTTCCT GGCCAATATG AGCCACGAGC TGCGCACCCC GCTCTCGGCG
GTGATCGGCT ATTCCGAGAT GCTCGGCGAG GAGCTGGAGG ATCTCGGCCA GGCCGAGCTG
CTGCCGGACC TGCGCAAGAT CGAGTCGGCC GCCCGCCACC TGCTCGGGCT CATCAACGAC
GTGCTCGACA TCTCCAAGAT CGAGGCCGGC CGCCTGACGC TGGCGGCGGA GAGCTTCGAC
GTCGCCAGCC TCATCGAGGA CGTCAGCGCC GCGACGCAGA GCCTGATCAC GAAGAAGCGC
AACCGCTTCC GCCTCGACCT CGAGGGCGAT CTGGGCGCGA TGCATCAGGA CCAGCTGAAG
CTGCGCCAGT CGCTGATCAA CCTGATCGGC AACGCCGCCA AGTTCTCCGA GGACGGCGAG
ATCGTCCTCT CCGTGCGCCG CGTCCGGGAG GAAGACGGCG AATGGCTGAG CTTTGCCGTC
TCCGACACCG GCATCGGCCT GACGCAGGAG CAGATCGGCC GGCTGTTCGA GCGCTTCTCC
CAGGCCGACG AATCGACCAC GCGCCAGTTC GGCGGCACCG GCCTGGGGCT TGCCATCACC
CGCGCCTTCA TCGAGCGGAT GGGCGGCACG ATCGGCGTCG AGAGCACGTT CGGTGCCGGC
GCGACCTTCA CCATCCGGCT GCCCGCCACC CTCGCGGCCC ACGAGGAGGA GGTCGAGGCG
CAGAGCGTCG CCGCCCGCGT CCACGAGATC ACCGAGGGCG AGGCGCATCT CCACGACGTG
GTGCTGCTCG TCGACGACGA CCCCGCCGCC CGCGACCTGC TCCAGCGCTT CCTCGAACGC
GAGGGCTTCC GGGTGCGCAC CGCCAATGAC GGACGGGCCG GCCTGACGCT CGCGCGGGCG
CTGAAGCCGC GGGCGATCCT GCTCGACATC GAGATGCCGC GCATGGACGG CTGGGCGGTG
CTGCACGCGA TCCGCACCGA TCCCGAGATC GCCGAAACGC CGGTCATCAT CACCAGCGTC
GTCAACGAGT TCAGCCTCGC TCACGTCCTC GGCGCCACCG ACTACATGGT CAAGCCGATC
GACTGGGGCG CGCTCAAGGA CGCGATGGAG CGCTATCGCC CGGTCGATCA CGAGGGCAGC
GTGCTCGTGG TGGACGACGA TGCCGATGCC CGCGAGCGGG TGCGCCGCAC CCTCGAGCGC
GACGGCTGGC AGGTGCGCGA GGCCGAGAAC GGCGCCGCCG CCCTGGACAG CCTGGACCAT
GCCCGGCCGA GCCTGATCCT ACTCGACCTG ATGATGCCGG TGATGGACGG CTTCGCCTTC
CTGCGGGCGC TGCGCGGACG CCCGGACGGC AACAGCATCC CCGTCGTGGT GCTCACCGCC
AAGGAGATCA CCCCCTCGGA GAAGGAGAGC CTGGGCGCCC AGGCCGACCG GCTGATCATG
AAGGGTTCGA TGAGCCTGTC CGAGATCGGC CGGCAATTGC GCGACCTCTA CGCCCGGCAA
GACGGCACCC CGCTCCCCGG ACAGATCCAG GGGCTGATCG ACAAGCTGTC GCCGTAG
 
Protein sequence
MMGDITVTVQ DGKVPATGPT MADFRNLADA LPQLAWIAEA DGNLVWYNRR WYDYTGTTPA 
EMADHGWRKL HHPDHLERAA ARFAACIAAG ESWQDTFPLR GKDGRYRWFL SLAEPVRNAD
GVIVRWYGTN TDVTETRLAQ DALGHSEQRF RALVDASAAV IWNTTAQGEL MPPQPRWAAY
TGQGEEAYQG WGWVDAVHPD DRARAAEVWA ECVEAVKVYE VEYRLRRYDG VWRDMEVRGV
PVLAEDGTIR EWVGLNIDIT ARKEAEAAIE QARAAAEAAN LAKSQFLANM SHELRTPLSA
VIGYSEMLGE ELEDLGQAEL LPDLRKIESA ARHLLGLIND VLDISKIEAG RLTLAAESFD
VASLIEDVSA ATQSLITKKR NRFRLDLEGD LGAMHQDQLK LRQSLINLIG NAAKFSEDGE
IVLSVRRVRE EDGEWLSFAV SDTGIGLTQE QIGRLFERFS QADESTTRQF GGTGLGLAIT
RAFIERMGGT IGVESTFGAG ATFTIRLPAT LAAHEEEVEA QSVAARVHEI TEGEAHLHDV
VLLVDDDPAA RDLLQRFLER EGFRVRTAND GRAGLTLARA LKPRAILLDI EMPRMDGWAV
LHAIRTDPEI AETPVIITSV VNEFSLAHVL GATDYMVKPI DWGALKDAME RYRPVDHEGS
VLVVDDDADA RERVRRTLER DGWQVREAEN GAAALDSLDH ARPSLILLDL MMPVMDGFAF
LRALRGRPDG NSIPVVVLTA KEITPSEKES LGAQADRLIM KGSMSLSEIG RQLRDLYARQ
DGTPLPGQIQ GLIDKLSP