| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_5109 |
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| Symbol | |
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| ID | 8007701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012848 |
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| Strand | + |
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| Start bp | 503730 |
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| End bp | 510029 |
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| Gene Length | 6300 bp |
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| Protein Length | 2099 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644822023 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_002973283 |
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| Protein GI | 241113448 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0669819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAACC AAACTAGCGA ATTCGCGCGC GACAGCGTTG CGGTAGATAG CCTCAATGGG
CATGACCACA AAACGATGGC GTTCGACGAC GCCAGCGCGC TTCTGGAGGT CCTTGTCGCG
GTTAGGCGCG GCGACTTTTC CGTAAGGATG CGGTCCGACC TCACAGGTCT CACCGGCAAA
GTCGCCGATG CCCTCAACGA CATCATTGCC GCCAATCAGC GCATGGCCCA GCAGCTCGAG
CATGTCGGGC AGGTGGTCGG TCGGGACGGG CGAACGAGCA CGCGCGTACG CTTCGGCCTG
TCGGACGGCT CCTGGTCTGA AATGGAGGGA TCGATCAATG GTCTGATCGA CGATCTCCTG
TGGCCGACGA CAGCTGTTAC GCGCACGATT ACGGCTGTCG TCAAGGGAGA TCTCTTGCGG
ACCGTGCCGC TCGACGTCGA CGGGCGGCCG CTCAAAGGTG AATTCCTGCG CTCGGCCGAT
ATCGTCAATA CGATGATCAA GCAGTTGAGC GTCTTCACCT CGGAAGTAAC GCGCGTCGCG
CGCGAGGTCG GCACGGACGG AAAACTCGGC GGCCAGGCGC AGGTGCCGGA GGTGACCGGC
GTCTGGAAGG ACCTCACCGA AAGCGTGAAC TCGATGGCGT CGAACCTGAC GGCGCAGGTG
CGCAACATCG CGGAAGTGAC GATCGCCGTT GCGAATGGCG ATCTTTCCAA GAAGATTACC
GTCGACGTGC GCGGCGAGAT CCTGCAGCTG AAGGAGGCGA TCAACACCAT GGTCGACCAG
CTCAGATCCT TCGCCTCGGA AGTGACGCGC GTCGCCCGCG AGGTCGGCAC CGAAGGCAAG
CTCGGCGGAC AGGCGCTGGT GCCGGGTGTC GCCGGAACCT GGAAGGACCT GACCGACAGC
GTCAATGCCA TGTGCGGCAA CCTGACGGCG CAGGTGCGCA ACATTGCCCA GGTGACCACG
GCCGTGGCGC GCGGCGACCT GTCGCGCAAG ATCACCGTCG ACGTCTCGGG CGAAATCCTG
GAGCTGAAGG AAACCATCAA CACGATGGTC GATCAGCTCA ACGGCTTTGC CGGCGAGGTG
ACGCGTGTGG CGCGTGAAGT CGGCACAGAG GGCCGCCTCG GCGGTCAGGC GCAGGTGCCA
GGCGTCGCCG GCACCTGGAA GGACTTGACC GATAACGTCA ATTCCATGGC CTCGAACCTC
ACCGCGCAGG TGCGCAACAT CGCCGAGGTC TCGACTGCGA TCGCCAACGG CGACCTCTCG
AAGAAGATCA CCGTTACGGT GTCTGGGGAA ATCCTCGAGC TGAAGGAAAC GATCAACACG
ATGGTCGATC AGCTGAACGC CTTTGCGTCG GAAGTGACCC GCGTGGCCCG CGAAGTCGGC
ACCGAAGGCC GGCTCGGCGG CCAGGCCAAT GTGCGCGGCG TCGCCGGCAC CTGGAAGGAT
CTAACCGAGA ACGTCAACTC GATGGGCGGC AACCTGACGG CGCAGGTGCG CAATATCGCG
GAAGTCTCGA CCGCCATCGC CAATGGCGAC CTGTCGAAGA AGATCACCGT CGACGTGAAG
GGGGAGATCC TCGAATTGAA GGAGACCATC AATACGATGG TCGATCAGCT GAATGCCTTC
GCCTCGGAAG TGACCCGCGT GGCGCGCGAA GTCGGAACGG AGGGACGGCT CGGCGGTCAG
GCGAATGTGC GCGGCGTTGC CGGCACCTGG AAGGACCTGA CAGACAGCGT CAATTCCATG
GCTTCCAACT TGACCGGGCA GGTGCGCAAC ATCGCCGAAG TCGCGACCGC CGTCGCCCAG
GGAGACCTGT CCAAGAAGAT CACCGTGACG GTGTCGGGCG AAATCCTCGA ACTGAAAGAG
ACCATCAACA CGATGGTCGA TCAGCTCAAC GGCTTTGCCG GCGAGGTGAC GCGTGTGGCG
CGCGAGGTCG GCACGGAAGG GCGGCTGGGC GGCCAGGCGA ACGTGCTCGG CGTCGCCGGC
ACCTGGAAAG ACCTGACCGA CAGCGTCAAC TCAATGGCAG GCAATCTGAC GGCGCAGGTG
CGCAACATCG CCGAAGTCTC GACTGCGATT GCCAATGGCG ACCTGTCGAA GAAGATCACG
GTGTCGGTCT CGGGTGAAAT CCTCGAGCTC AAGGAAACGC TGAACACCAT GGTCGATCAG
CTGAACCGCT TTGCTTCCGA AGTCACCCGC GTTGCCCGCG AGGTCGGCAC CGAGGGCAAG
CTCGGCGGCC AGGCGCAGGT GCCAGGTGTC GCCGGCACCT GGAAGGATCT CACCGAAAAC
GTCAATTCCA TGGCCTCCAA CCTGACCGGC CAGGTGCGAA ACATCGCCGA AGTGACGACG
GCCGTGGCGC GCGGCGACCT GTCGCGCAAG ATCACCGTCG ACGTGAAGGG GGAAATCCTC
GAACTGAAGA ACACCATCAA CACGATGGTG GACCAGCTCA ACGCCTTTGC CGGCGAAGTG
ACGCGCGTCG CCCGCGAAGT CGGCACCGAA GGCAAGCTCG GCGGCCAGGC GCAGGTCTCC
GGTGTTGCCG GCACCTGGAA GGACCTGACC GACAGCGTCA ACTCCATGGC CGGCAACCTG
ACGGCGCAGG TGCGCAACAT CGCCGAGGTG GCTACCGCTA TCGCCAACGG CGACCTGTCG
CGCAAGATCA CGGTCGACGT GCGCGGCGAA ATCCTGCTCT TGAAGGATAC GCTGAATACC
ATGGTCGATC AGCTTCGCTC CTTTGCCGGC GAAGTGACGC GTGTTGCCCG CGAAGTCGGC
ACCGATGGCA GGCTGGGCGG CCAGGCCGTC GTTCCCGGCG TCGCCGGCAC CTGGAAGGAC
CTGACCGATA ACGTCAACCT GCTCGCTGCC AATCTGACGA CCCAGGTTCG AAACATCGCC
GAAGTGACGA CAGCCGTGGC GCGCGGCGAC CTGTCGCGCA AGATCACCGT CGACGTGAAG
GGGGAAATCC TCGAACTGAA GAACACCATC AATACGATGG TGGACCAGCT CAACGCCTTC
GCCGGCGAAG TGACGCGTGT CGCCCGTGAA GTCGGCACCG AAGGCAAGCT CGGCGGCCAG
GCACAGGTGC CGGGCGTTGC CGGAACCTGG AAGGACTTGA CCGACACCGT CAACGTCATG
GCCGCCAACC TGACCGAGCA GGTCCGCGGC ATCGTCAAGG TGGTGACGGC GGTGGCGAAC
GGCGACCTCA AGCAAAATCT CACCGTCGCA TCGAAGGGCG AGGTGGCCGC CCTTGCCGAG
ACCATCAACA ACATGACCAA CACGCTCGCG ACCTTTGCCG ATCAGGTGAC CACGGTTGCG
CGTGAGGTGG GCGTGGAAGG CCGCCTCGGC GGGCAGGCGA ATGTTCCGGG TACTGCGGGA
ACCTGGAAGG ACTTGACCGG CAACGTCAAC CTGCTTGCCG CCAACCTGAC GACGCAGGTG
CGCGCCATTG CCGAGGTGGC GACCGCCGTC ACCAAGGGTG ACCTGACGCG CTCGATCAAG
GTCGACGCGC GCGGCGAAGT GGCCGAGCTC AAGGACAACA TCAATACGAT GATCGACAAC
CTCAGGCTGA CCACCGAGCG CAACACCGAG CAGGACTGGC TGAAGACCAA CCTGGCGCGC
TTCACCAATA TGCTGCAGGG GCAGCGCGAC CTGACGCTGG TCGGCAAGAT GCTGCTGTCG
GAGCTGGCGC CTCTGGTCGG CGCCCATCAG GGGGTCATCT ACCAGGTGGA TGCCGACGAG
CGGCAGCCGA TCTTGTCGCT GCTTTCCGTC TACGCGAAAG GGGGCGAGGC GGCGCACCCG
GCGCGGCTCG AATTCGGCCA GGGACTTGTC GGCCAGTGCG CCAGCGACGC CCGCCGCATC
CTGGTCACCG ACCTTCCCGA CAACGTCGTT CCGATAAGCT CCGGCGTGTT CACGACCCTG
CCGAGGAGCG CCATCGTGCT GCCGGTGCAC TTCGAAGGTC AGGTGAAGGC GGTGATCGAG
CTGGCCTCCG TCGGCGAATT CACCGAGTTG CAGCTGTCCT TCCTCGATCA GCTGACGACA
TCGATCGGCA TCGTCCTCAA CTCGATCGAA GCGACGATGC AGACCGAAGG CCTGCTCAAG
CAGTCCCAGC AGCTTGCCGC CGAGCTTCAG ACGCAGCAGC GCGAGCTGCA GCAGACCAAC
GAGCAGCTCG GGCAGAAGGC GCAGCAACTG GAGGAGCGCA ACGTCGAAGT CGAGGCGAAG
AACCAGGAAA TCGAGCAGGC CAGGCGCGCG CTCGAGGAAA AGGCAACGGA GCTGGCGCTG
ACATCGAAGT ACAAATCCGA ATTCCTCGCC AACATGTCGC ATGAGCTGCG CACGCCTTTG
AATTCGATCC TCATCCTCGG CCAGCAACTG GGAGAAAATC CGGATGGCAA CCTCTCGGGC
AAACAGGTCG AGTTCGCAAA GACGATCCAC GGCGCGGGAA CCGATTTGTT GAACCTGATC
AGCGACATCC TCGACCTGTC GAAGATCGAG TCCGGAACAG TCTCGGTCGA TGCCGAAGAG
ATTTTTGTCA GCAACCTGCT CGAGATGATG GCGCGGCCAT TCCGGCACGA GGCCGAAAAC
CGGGACCTGT CGTTCTCGGT CGATGTCGGC GCCGATGTTG CAAAGAGCCT CATCACGGAT
TCGAAGCGAC TGCAGCAGAT CCTCAAAAAC CTGCTGTCGA ATGCCTTCAA GTTCACCGCG
CAGGGCGGCG TGACACTTCG CGTCGCGTCG GCAACGAGCG GCTGGTCGTC CGATCATCCC
TCCCTCAAGC ACGCGCCTTC GGTCATTGCC TTCGAAGTCG TCGATACCGG CATCGGCATA
CCGCCCGAAA AACAGCGCAT CATTTTCGAG GCGTTCCAGC AGGCGGACGC TTCGACGAGC
CGCAAATACG GCGGCACCGG CCTCGGCTTG GCGATCAGTC GCGAACTGGC GAACCTGCTC
GGCGGCGAAA TCCAGCTGCG CAGCACCCCC GGTATCGGCA GCACCTTCGT CCTCTATCTG
CCGCTCACCT ATGTCGGCGC CGGCGCGGCT GCCCCCAAGA CCGTTCCGTC GGCAAATGTC
GTAGAATTCG CCGAGGCGGC AGCAAACCGC CGCGCCGAAA AGCCGATCGA ACATGTTGAA
GACGATCGCC ATCAGATAGA GGCCGGCGAC TCCGTGCTGC TCGTCGTCGA GGACGATGCG
CATTACGCCC GCGTGCTGGT GGATCTCGCC CGCGACAATG GATTCAAGGT TCTGGTGGCG
ATGCGTGGCA GCGATGCGCT CGCACTCGCG CAGGACTACA GGCCGGCGGC GATCTCGCTC
GACATCTTTC TGCCCGATAT GCTCGGCTGG ACGGTGCTGA GCCAGCTCAA GCAGAATCCG
CAGACGCGGC ATATTCCGGT CCAGATCATC AGCCTCGACG AGGATCGCCA ACATGGGCTG
ACCCGCGGCG CCTTCGCCTT CATGAGCAAG CCGACGACAC CAGAAGGCCT TGGCAAGGCA
CTGTCGCGAT TGAAGGCCTA TGCACAACCG CGCCGCAAGC ATCTGCTGCT GGTGGAAGAC
AACGAGGCCG AGCGTCTGAG CGTCACCGCC CTTCTCGGAC ATGACGACAT CGATATCACC
AGCGTCGGCT CCGGATCGGA GGCTCTCGAC GCCCTTCGGC AGAATGCCGC CGACTGCGTG
GTGCTCGACC TTTCCCTTCC CGACATGTCC GGCTTCGACG TGCTGGAGCA GATACGCGAC
GACGCCGAGA TCCGCGAGGT GCCGGTGGTC GTCTTCACCG GCCGGGAGCT TTCCGCCGAG
GAAGACGCGG CACTGCACAG CATGGCCCGC AGCGTCGTGG TCAAGGGGGT CGAGTCGCCC
GAACGTCTCC TGGATGAGAC GGCCTTGTTC CTGCACCGGG TGGTCGCCGA CCTGCCGGCC
GCAAAACAGG CGACGCTGCA GGAACTGCAC AGCTCGGATG AGGATCTTGT CGGCGAGACC
GTGCTGCTCG TCGACGACGA TGCCCGCAAC ATCTTCGCGC TGAGCAGCGT CCTCGAACGC
CGGGGAATGA AGGTCCTGAC CGCGACGACC GGCAGCGAAG CCATCGATGT CATCAACAAC
GAACCCTCTG TCGCGATCGT GCTGATGGAC ATCATGATGC CTGGAATGGA CGGCTACGAG
ACGATGCAGG TCATCCGTTC GGAGCCCCGG TTCCGGCGGC TGCCGATCGT GGCGCTGACG
GCCAAGGCGA TGAAGGGCGA CCGCGAGAAA TGCCTGGAAG CGGGCGCATC CGACTATCTG
GCGAAGCCGG TCAATACCGA ACAGCTTCTG TCGGCTCTTC GCATGTGGCT GCATCGCTGA
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| Protein sequence | MSNQTSEFAR DSVAVDSLNG HDHKTMAFDD ASALLEVLVA VRRGDFSVRM RSDLTGLTGK
VADALNDIIA ANQRMAQQLE HVGQVVGRDG RTSTRVRFGL SDGSWSEMEG SINGLIDDLL
WPTTAVTRTI TAVVKGDLLR TVPLDVDGRP LKGEFLRSAD IVNTMIKQLS VFTSEVTRVA
REVGTDGKLG GQAQVPEVTG VWKDLTESVN SMASNLTAQV RNIAEVTIAV ANGDLSKKIT
VDVRGEILQL KEAINTMVDQ LRSFASEVTR VAREVGTEGK LGGQALVPGV AGTWKDLTDS
VNAMCGNLTA QVRNIAQVTT AVARGDLSRK ITVDVSGEIL ELKETINTMV DQLNGFAGEV
TRVAREVGTE GRLGGQAQVP GVAGTWKDLT DNVNSMASNL TAQVRNIAEV STAIANGDLS
KKITVTVSGE ILELKETINT MVDQLNAFAS EVTRVAREVG TEGRLGGQAN VRGVAGTWKD
LTENVNSMGG NLTAQVRNIA EVSTAIANGD LSKKITVDVK GEILELKETI NTMVDQLNAF
ASEVTRVARE VGTEGRLGGQ ANVRGVAGTW KDLTDSVNSM ASNLTGQVRN IAEVATAVAQ
GDLSKKITVT VSGEILELKE TINTMVDQLN GFAGEVTRVA REVGTEGRLG GQANVLGVAG
TWKDLTDSVN SMAGNLTAQV RNIAEVSTAI ANGDLSKKIT VSVSGEILEL KETLNTMVDQ
LNRFASEVTR VAREVGTEGK LGGQAQVPGV AGTWKDLTEN VNSMASNLTG QVRNIAEVTT
AVARGDLSRK ITVDVKGEIL ELKNTINTMV DQLNAFAGEV TRVAREVGTE GKLGGQAQVS
GVAGTWKDLT DSVNSMAGNL TAQVRNIAEV ATAIANGDLS RKITVDVRGE ILLLKDTLNT
MVDQLRSFAG EVTRVAREVG TDGRLGGQAV VPGVAGTWKD LTDNVNLLAA NLTTQVRNIA
EVTTAVARGD LSRKITVDVK GEILELKNTI NTMVDQLNAF AGEVTRVARE VGTEGKLGGQ
AQVPGVAGTW KDLTDTVNVM AANLTEQVRG IVKVVTAVAN GDLKQNLTVA SKGEVAALAE
TINNMTNTLA TFADQVTTVA REVGVEGRLG GQANVPGTAG TWKDLTGNVN LLAANLTTQV
RAIAEVATAV TKGDLTRSIK VDARGEVAEL KDNINTMIDN LRLTTERNTE QDWLKTNLAR
FTNMLQGQRD LTLVGKMLLS ELAPLVGAHQ GVIYQVDADE RQPILSLLSV YAKGGEAAHP
ARLEFGQGLV GQCASDARRI LVTDLPDNVV PISSGVFTTL PRSAIVLPVH FEGQVKAVIE
LASVGEFTEL QLSFLDQLTT SIGIVLNSIE ATMQTEGLLK QSQQLAAELQ TQQRELQQTN
EQLGQKAQQL EERNVEVEAK NQEIEQARRA LEEKATELAL TSKYKSEFLA NMSHELRTPL
NSILILGQQL GENPDGNLSG KQVEFAKTIH GAGTDLLNLI SDILDLSKIE SGTVSVDAEE
IFVSNLLEMM ARPFRHEAEN RDLSFSVDVG ADVAKSLITD SKRLQQILKN LLSNAFKFTA
QGGVTLRVAS ATSGWSSDHP SLKHAPSVIA FEVVDTGIGI PPEKQRIIFE AFQQADASTS
RKYGGTGLGL AISRELANLL GGEIQLRSTP GIGSTFVLYL PLTYVGAGAA APKTVPSANV
VEFAEAAANR RAEKPIEHVE DDRHQIEAGD SVLLVVEDDA HYARVLVDLA RDNGFKVLVA
MRGSDALALA QDYRPAAISL DIFLPDMLGW TVLSQLKQNP QTRHIPVQII SLDEDRQHGL
TRGAFAFMSK PTTPEGLGKA LSRLKAYAQP RRKHLLLVED NEAERLSVTA LLGHDDIDIT
SVGSGSEALD ALRQNAADCV VLDLSLPDMS GFDVLEQIRD DAEIREVPVV VFTGRELSAE
EDAALHSMAR SVVVKGVESP ERLLDETALF LHRVVADLPA AKQATLQELH SSDEDLVGET
VLLVDDDARN IFALSSVLER RGMKVLTATT GSEAIDVINN EPSVAIVLMD IMMPGMDGYE
TMQVIRSEPR FRRLPIVALT AKAMKGDREK CLEAGASDYL AKPVNTEQLL SALRMWLHR
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