| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3818 |
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| Symbol | |
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| ID | 3911621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4360663 |
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| End bp | 4364943 |
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| Gene Length | 4281 bp |
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| Protein Length | 1426 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637885719 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_487423 |
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| Protein GI | 86750927 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAGACG TCGAATGGCC GGGGTCATCG CCGGGGCGCG GGTCCGCTGG TCACGAGAAC
CTGTTTCTCG GGCGCGGCGA ACTCACGACC CTGCTGCGGC AATTCGATTG GGCGGCAACG
TCGCTCGGTC CGCCCGAGCA TTGGCCGCAG GCGCTCAAGA CCGCCGTGCG CATCATGCTG
ACCTCGCAGC AGCCGATCTG GATCGGCTGG GGCCTGGATT TGATCTATCT TTATAACGAC
CCCTACAAGG CGATCATCGG CGGCAAGCAT CCCTGGGCGC TGGGCCGGCC GACCCGGGAG
GTCTGGCACG AAATCTGGGA CGATATCGCG CCGCTGCTGG CCAAGGCGAC CAGCGGCGAC
GAAGGCACCT ATGTCGAAGC CCAGCTCCTG ATCATGGAGC GGAACGGGTT TCCCGAGGAA
ACCTATTACA CCTTCTCCTA CAGCCCGATC CCCACCGAAG ACGGCTCCCC CGGCGGCATC
TTCTGCGCCA ATACCGACGA CACCAAGCGT GTCATCAGCG AGCGGCAATT GTCGCTGCTG
CGCGATCTCG CCAGCAGCGC CGCGCAATCC CGCACCGTCG CGCAGGCCTG CGACAGCGCC
GCCCGAGCGC TTGCGACCGA TGCCCGCGAC TTGCCCTTCG CGCTGATCTA TCTGGTCGAA
CCTGGCGACG CGAGCGTCCG GCTCGCCGCC TCGGCCGGGA TCGACGCCGA CCACCCCGGC
GTCAAGCCGG TGCTGTCGCT GGAAGAAGGC GCCGAATACT GGCCACTGGC AGAGGCGCTT
CAGTTCAATG AGCCGCGGCT GATGCGCGAC CTGCCGGGGC ATTTCGGGTT CGATTTCCCG
GCCGGCGGCT GGCGCCAGCC GCCGAGCCAG GCGATCGTCG TGCCGATCCA GTCGAGCGGC
GACACCGGCC ATTCCGGCTT TCTGATCGCC GGCCTCAATC CGTTCCGGCT GTACGACACC
GCCTATCGGG ATTTCCTCAC GCTGGTGGCG GCGCAGATCG CCGCCGCGAT CACCAACGGC
GATTCCTACG AGGAAGAACG CCGCCGCGCC GAGGCGCTGG CCGAGATCGA CCGCGCCAAG
ACCGCGTTCT TCTCCAATGT CAGCCATGAA TTCCGCACGC CGCTGACGCT GATGCTCAGC
CCGCTCGAGG ACGTGCTCAA TCAGGCGACT CTGCCGAACG ATCAGCAGGC GCTGCTCGGC
ATCGCGCATC GCAACGGCCT GCGGCTGCTG AAGCTGGTCA ACACCCTGCT CGACTTCGCC
CGGATCGAGG CCGGCCGGGT CACGGCGCAT TTCACCCCGG TCGACCTGTC GTCGTTCACG
GCGGAGCTCG CCTCCAACTT CCGCTCCGCC ATCGACAAGG CCGGGCTGCG CCTGACGATC
GACGCGCCGC CGTTGCCGCA GCCGGTCCAT GTCGATCGCG ACATGTGGGA GAAGGTGGTT
CTCAACCTGC TGTCCAACGC GTTCAAGTTC ACCTTCGAGG GCGAGATCGC CGTCACGTTG
CGCCCCACGC CGGACGGCCG CTCCGCCGAG ATCGTGGTCC GCGACACCGG CACCGGCATT
CCGCCGGACG AGATCCCGCA TTTGTTCGAG CGCTTCCGCC GCATCGACGG CGCGCGCGGC
CGTTCGATCG AGGGCAGCGG CATCGGGCTG GCGCTGGTGC AGGAACTGGT CAAGCTGCAC
AGCGGCAGCA TCGGCGTCGA GAGCGAACTC GGCCGCGGCA GCGCCTTCCG CGTCACGCTG
CCGTTCGGCG CCGCGCATCT GCCCGCCGAC CGCCCAAGAC ACGATGCGCT GCAGGTCACC
ACCAATATCC GCGCCCAGGC CTATCTCGAC GAGGCGATGG GCTGGCTGCA GGGCGAACGC
GACCCGGAGA CCGACGCCCC CTACGCCTCC ACCGCCGAGG ATCTCGGGCG CGGCACCATC
AGCAGCGGTG CGGCGCGGCC GCGTATCCTG CTCGCCGACG ACAATCCCGA CATGCGCGAC
TACGTCACCC GGCTGCTCGG CGAAAGCTAC GAGGTCGAAA CCGTCGGCGA CGGCGTCGCC
GCGCTGGAGG CGGCGTGGAA GCACCGGCCG GACCTGGTGA TCTCCGACAT CATGATGCCG
CGGCTCGACG GCCTGAGCCT GCTGAAGGCG CTGCGCAGCG ATTCCACGCT GGCCGACGTG
CCGGTGATCT TCCTGTCCGC GCGCGCCGGC GAAGAGGCGC GGGTCGAGGG CCTCGAGGCC
GGCGCCGACG ATTATCTCAG CAAGCCGTTC AGCGCCCGCG AATTGCTGGC GCGGGTGCGC
TCCAATCTCG ACATCGCCGA GGTGCGGCGC GAGGCGCTGC GCACCGAGCA CGCGTTGCGG
CAGGAGTCCC AGGCCGCGCG GCAACGGGCC GAGGGCATTC TCGCCAGCAT CAGCGACGGC
TTCATCGCGC TCGATGCCGA CTACCGTTTC ACCTACGTCA ACGCCGCCGC CGAACGGATG
ATGCGGCGCT CCGCATCCGA CCTGATCGGG AAGGTCGCCG CCGAGGCCTA TCCGGCGGTG
GTCGGCAGCC GGATCGAGGA CAGCCTTCGC CGCGCCCTCA CCCAGCGGAT CGGATCCGAG
TTCGAGATCG AGCATCCGTC GAGCGACCGC TGGTTTCACC TGCGCGTCGC GCCGACCAAC
GGCGAGAGCG TCTCGGTGTA TTTCCGCGAC ATCACCGAAC GCAAGCGGAC CGAGACCGCC
TTGCGCGACC TCAACGACCG GCTCGAGGAG CAGGTCGCGC AGCGCACCGC CGAGCTGCGG
CAGAAGGAGG CGCGGCTGCG CACCATCTTC GCCGCGAGCT ACACCTATCA GGCCCTGCTC
GACGTCGACG GCGCGGTGAT CGACGCCAAC CTCACCTCGC TCTCCGGCAT CGGCGCGAGG
CTCGAGGACG TCGTCGGCCA GCCGTTGTGG GACACGCCGT GGTTCGCCGG CACGCCCGGG
ATGCAACAGA CGATCCGCGA CGACGTCGCC GCCGTCGCTG CCGGCCAGAG CGTGCGGCGC
GAGATGCAGC TCGATCTGCC GGTCGGCGGC TGGCGCTGGT TCGACTTCCA GATGCGCCCG
GTGCACGACG CGCAGGGGCA GATCATCGCG ATCGTGCCCG AGGCGGTCGA GATCACCGAG
CGGCGCAAGG CCGAGGAAGC CTTCCGCCAG GCGCAGAAGA TGGAAGCGAT CGGCCAGCTC
ACCGGCGGCG TCGCGCACGA CTTCAACAAT CTGCTGACCG TGATCCGCTC CTCCGCCGAT
CTGCTGCGCC GGCGCGAATT GCCGCCGGAG CGGATGCGCC GCTACGTCGA CGCGATCTCC
GACACCGCCG ACCGCGCCGC CAAGCTGACC GGTCAGCTCC TCACCTTCGC CCGCCGACAC
GCCCAGAACC GCCAGGTGTT CGACGCGGCC GGGCAGATCG AGCAGACCGC CGAGATGCTG
CGCACCGCAC TCGGCTCGCG CGCCAGCTTC GCGTTGAAGA TCGACCAGCG GCCGCTCGCG
GTCGAAGCCG ACGCCAATCA GTTCGACGCC GCGATGGTCA ATCTCGTCGC CAATGCCCGC
GACGCGATGG ACGGCCAGGG CGCGCTGGAA ATCCGTGTCG CAGCGGCGGC GCCGACCGCG
CAGGAAACCG CCGCAGGCGT CATGGACGTG GTCGCGGTGT CGATCGCCGA CACCGGCGCG
GGCATTCCGC AGGACCAGAT CGACCGCATC TTCGAGCCGT TCTTCACCAC CAAGGACGTC
GGCCGCGGCA CCGGCCTCGG GCTGTCGCAG GTCTACGGCT TCGTCAAGCA ATCCGGCGGC
AACGTCACCG TCGAAAGCGC GCTCGGCTGC GGCACCACCA TCACGCTGCG GCTGCCGCTC
AGTTCCAAGC CGATCGAGGT GCGCGATCGC GTGCCCAACG GCGATACGAC CAGACCAGCC
GAGCGCCGTT GCGTGCTGGT GGTCGAAGAC AACGCCGAGG TCGGCGAGTT CTCGACCCAG
CTGCTGCACG ACCTCGGCTA CGAGACCGTG CTGGCGACGA GCGCCGAGCA GGCGCTGCAA
TTGCTCGACC AAGACGACGC CGCCCGCTTT CATCTGGTGC TCAGCGACGT GGTGATGCCC
GGCATGGACG GCGTCGCGCT CGGCCGCGAG ATCAGGAGGC GCCTGCCGCA CCTGCCGGTG
GTGCTGAATT CGGGCTACGC CCACGTGCTG GCCGACGATG GCCATCACGG CTTCGAATTG
CTGCACAAGC CGTATTCGGT CGAGGACCTG TCCAAGGTGC TGCGCCGGGC GCTGATGGAC
AGCCGCCGCG CGACGAGCTG A
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| Protein sequence | MADVEWPGSS PGRGSAGHEN LFLGRGELTT LLRQFDWAAT SLGPPEHWPQ ALKTAVRIML
TSQQPIWIGW GLDLIYLYND PYKAIIGGKH PWALGRPTRE VWHEIWDDIA PLLAKATSGD
EGTYVEAQLL IMERNGFPEE TYYTFSYSPI PTEDGSPGGI FCANTDDTKR VISERQLSLL
RDLASSAAQS RTVAQACDSA ARALATDARD LPFALIYLVE PGDASVRLAA SAGIDADHPG
VKPVLSLEEG AEYWPLAEAL QFNEPRLMRD LPGHFGFDFP AGGWRQPPSQ AIVVPIQSSG
DTGHSGFLIA GLNPFRLYDT AYRDFLTLVA AQIAAAITNG DSYEEERRRA EALAEIDRAK
TAFFSNVSHE FRTPLTLMLS PLEDVLNQAT LPNDQQALLG IAHRNGLRLL KLVNTLLDFA
RIEAGRVTAH FTPVDLSSFT AELASNFRSA IDKAGLRLTI DAPPLPQPVH VDRDMWEKVV
LNLLSNAFKF TFEGEIAVTL RPTPDGRSAE IVVRDTGTGI PPDEIPHLFE RFRRIDGARG
RSIEGSGIGL ALVQELVKLH SGSIGVESEL GRGSAFRVTL PFGAAHLPAD RPRHDALQVT
TNIRAQAYLD EAMGWLQGER DPETDAPYAS TAEDLGRGTI SSGAARPRIL LADDNPDMRD
YVTRLLGESY EVETVGDGVA ALEAAWKHRP DLVISDIMMP RLDGLSLLKA LRSDSTLADV
PVIFLSARAG EEARVEGLEA GADDYLSKPF SARELLARVR SNLDIAEVRR EALRTEHALR
QESQAARQRA EGILASISDG FIALDADYRF TYVNAAAERM MRRSASDLIG KVAAEAYPAV
VGSRIEDSLR RALTQRIGSE FEIEHPSSDR WFHLRVAPTN GESVSVYFRD ITERKRTETA
LRDLNDRLEE QVAQRTAELR QKEARLRTIF AASYTYQALL DVDGAVIDAN LTSLSGIGAR
LEDVVGQPLW DTPWFAGTPG MQQTIRDDVA AVAAGQSVRR EMQLDLPVGG WRWFDFQMRP
VHDAQGQIIA IVPEAVEITE RRKAEEAFRQ AQKMEAIGQL TGGVAHDFNN LLTVIRSSAD
LLRRRELPPE RMRRYVDAIS DTADRAAKLT GQLLTFARRH AQNRQVFDAA GQIEQTAEML
RTALGSRASF ALKIDQRPLA VEADANQFDA AMVNLVANAR DAMDGQGALE IRVAAAAPTA
QETAAGVMDV VAVSIADTGA GIPQDQIDRI FEPFFTTKDV GRGTGLGLSQ VYGFVKQSGG
NVTVESALGC GTTITLRLPL SSKPIEVRDR VPNGDTTRPA ERRCVLVVED NAEVGEFSTQ
LLHDLGYETV LATSAEQALQ LLDQDDAARF HLVLSDVVMP GMDGVALGRE IRRRLPHLPV
VLNSGYAHVL ADDGHHGFEL LHKPYSVEDL SKVLRRALMD SRRATS
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