Gene Sfum_3211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3211 
Symbol 
ID4458449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3933507 
End bp3934691 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content58% 
IMG OID639703983 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_847319 
Protein GI116750632 
COG category[T] Signal transduction mechanisms 
COG ID[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGGA AAACAAAAAT CCTTGTGGTT GACGACGAAC CGGAGATGTT GTCCCTGACC 
AGTTGGATTC TCGATTCGGC CGGCTACGAG GTTTTTGAGG CATCCACCGC GGCGGAATGC
CTCGAGTCCG TGCATGAGCA TCGTCCCGAC CTGGTCCTCC TCGATGTCGT CCTTCCCGAC
CTCAGCGGCC TTGAGGTTTG TCGAAGAATC AAGGGGGACC CCGACCTCGG GAGGACCTTC
GTGGTCCTCA TGTCCGGCAG CCTGGTGTCG CCCTCGCAGC AGGCCCTGGG CTTGGACATG
GGTGGAGACG GTTACATTGC GCGGCCGGTG GCCAGTGCGG AACTGCTGGC AAGAGTGCAG
TCGCTGGTTC GCATCAAACG AGTGGAAGAC GCACTCCAGA ACGCATATTC TCAGCTGGAG
AAACGGGTTG AGGAGCGGAC CGCCGAATTG GCGGAAGCCA ACGAGCAGCT GCAGTCGGAG
ATCGAAGAAC GTAAACGGAC CGAGCAGAAG CTGCGAAGAT CGGAAAGTCA GCTTCGATTT
CTGTCTTCCC AGCTCATCCG GACCCAGGAA GAGGAGCGGA AAAGAATCGC GCTCGAGGTC
CACGACAGCA TCGGTTCCAC GCTTACGGCC ATCAAGTTTT CCCTTGAGCA CATCGTGTCC
GAAGCCAAGG ATGCTCCGGC CGTTTGTGAA GCGCTCAAAA CGCCCATTTC ATTCACTCAG
ATCGCCATCG AAGAATCCCG CAAGATCATG AACGACCTGC GTCCCGCCGT GCTCGACGAT
TTAGGGATCT CCGCCACGGT CGGGTGGTTT TGCAGGCAGT TCCAGAGCAT CCATCCCGCG
ATTCGAATCG AACGCAGGGT TGAAGCCAAC GAGGAAGAAA TACCCGAGCC CTTGAAAATC
GTCGTGTTCA GGATCATGCA GGAGGCTTTT CACAACATTT CCAAGCACAG CCGGGCCGAT
TTGGTCAGGG TTTCCTTGAC CGTGAAAGGC GGTGCCCTGA GGTTGACCAT CGAGGACAAC
GGGGTCGGTT TCAATGTGAA GGCTTTGCGA CGCAAGGAAG GGCAAATAAG GAGGCTCGGG
CTCACCAGCA TGAAAGAGCG CACGGAACTC TCCGGCGGGT CTTTCACTCT CAAGTCCCGA
ACGGGCGGGG GCACGACGGT CGAAGCTTTC TGGCCGAAAG TTTAG
 
Protein sequence
MNRKTKILVV DDEPEMLSLT SWILDSAGYE VFEASTAAEC LESVHEHRPD LVLLDVVLPD 
LSGLEVCRRI KGDPDLGRTF VVLMSGSLVS PSQQALGLDM GGDGYIARPV ASAELLARVQ
SLVRIKRVED ALQNAYSQLE KRVEERTAEL AEANEQLQSE IEERKRTEQK LRRSESQLRF
LSSQLIRTQE EERKRIALEV HDSIGSTLTA IKFSLEHIVS EAKDAPAVCE ALKTPISFTQ
IAIEESRKIM NDLRPAVLDD LGISATVGWF CRQFQSIHPA IRIERRVEAN EEEIPEPLKI
VVFRIMQEAF HNISKHSRAD LVRVSLTVKG GALRLTIEDN GVGFNVKALR RKEGQIRRLG
LTSMKERTEL SGGSFTLKSR TGGGTTVEAF WPKV