| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2969 |
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| Symbol | |
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| ID | 5663359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3636287 |
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| End bp | 3636976 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237608 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001502821 |
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| Protein GI | 157962787 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000855765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGCAA GGATTTTGAT AGTTGAAGAT GAGTTAGCCA TCCGAGAGAT GTTAACTTTT
GTTTTGGAAC AGCATGGTTA TACCACAGTC GCCGCCGAGG ATTACGACTC TGCACTAGAT
ATGTTAACCG AGCCATACCC TGATCTTGTT TTACTCGATT GGATGTTCCC TGGTGGTAGC
GGTATTCAGT TAGCTAAGCG CTTACGCCAA GACGAATTCA CTCGTCATAT TCCGATTATC
ATGTTGACTG CACGTGGTGA AGAGGAAGAC AAGGTTCGCG GGCTAGAAGT GGGGGCCGAT
GATTTTATGA CTAAGCCTTT CTCTCCCAAA GAGCTAGTGG CGCGGATTAA AGCCGTTATG
CGTCGCAGTG CTCCGACTTG CCTAGAAGAT CCAATCGATG TTCAAGGCCT GCAATTGGAT
CCTGTTAGCC ACCGAGTCAC AGTGGGTGAT GAAGTGCTTG ATATGGGACC GACTGAGTTT
CGACTGCTGC ATTTCTTTAT GACCCATCAA GAACGAGTTT ATAGCCGTGA ACAGCTACTA
GACAATGTCT GGGGAACCAA TGTGTATGTT GAAGACCGCA CTGTGGATGT ACATATTAGA
CGCTTAAGAA AAGCAGTGAC TCATTCAGGG CATGATCGCC TGATCCAAAC AGTTCGCGGC
GCTGGTTATC GTTTCTCTAC TCGCCTCTAG
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| Protein sequence | MTARILIVED ELAIREMLTF VLEQHGYTTV AAEDYDSALD MLTEPYPDLV LLDWMFPGGS
GIQLAKRLRQ DEFTRHIPII MLTARGEEED KVRGLEVGAD DFMTKPFSPK ELVARIKAVM
RRSAPTCLED PIDVQGLQLD PVSHRVTVGD EVLDMGPTEF RLLHFFMTHQ ERVYSREQLL
DNVWGTNVYV EDRTVDVHIR RLRKAVTHSG HDRLIQTVRG AGYRFSTRL
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