| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1666 |
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| Symbol | |
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| ID | 4022146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1875805 |
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| End bp | 1880088 |
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| Gene Length | 4284 bp |
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| Protein Length | 1427 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637961861 |
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| Product | ATP-binding region, ATPase-like |
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| Protein accession | YP_568804 |
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| Protein GI | 91976145 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.207779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAGACG TCGAATGGCC GGGGTCATCG CCCGGGCGCG GAGCCGCTGG TCACGAGACC
CTTTTCCTGG GACGCAGCGA GCTCACGAGC CTGTTGCGGC GGTTCGATTG GGCGGCCACA
CCGCTTGGCC CCCCGGAGCA ATGGCCGCAG GCGCTCAAGA CCGCGGTTCG CATCATGCTG
ACCTCGCAGC AGCCGATCTG GATCGGCTGG GGCGAGCAGC TGACCTATTT CTATAACGAT
CCCTACAAGG CGATCATCGG CGGCAAGCAT CCATGGGCGC TGGGGCGTCC CACCAGAGAG
GTGTGGCACG AGATTTGGGA CGACATCGGC CCCCTGCTCG CCAAGGCGAT GGGCGGCGAC
GAAGGCACCT ATGTCGAAGC CCAACTCCTG ATCATGGAGC GCAACGGCTT CCCCGAGGAG
ACCTACTACA CTTTCTCCTA TAGCCCGATC CCGACCGACG ACGGCTCCGC CGGCGGAATC
TTCTGCGCCA ACACCGACGA CACCCAGCGC GTGATCAGCG AGCGGCAATT GTCGCTGCTG
CGCGAACTGG CCAGCAACGC CGCGCAGTCC CGCACCGTCG CGCAGGCCTG CGAAAGCACC
GCGAAAGCGC TGGCGACCGA TCCCCGCGAC CTGCCCTTCG CGATGATCTA TCTGATGGAG
CCCGGCGGCT CGAGTGTCCG GCTCGCCGCG TCGGCCGGGA TCGACGCCGA CCATCCCGGC
GTCAAGCCGG TGCTGTCGCT GGTCGACGGC GCCGAATGCT GGCCGCTCGC CGAGGCGCTG
CGGTTCAACG AACCGCGGCT GCTGCGCGAT CTGTCGGCGC AATTCGGATT CGATTTCCCG
GCCGGCGGCT GGCGCCAGCC GCCGAGCCAG GCGATCGTGT TGCCGATCCC GTCGAGCGGC
GACACCGGCC AGCCCGGCTT CCTGATCGCC GGCCTCAACC CGTTCCGGTT GTACGACGCC
ACCTACCGGG ACTTCTTCAC GCTGGTCGCC GCGCAGATCG CCGCCGCGGT AACCAATGGC
GACGCCTACG AAGAAGAGCG CCGCCGCGCC GAGGCGCTGG CCGAGATCGA CCGCGCCAAG
ACCGCCTTCT TCTCCAATGT CAGCCATGAA TTCCGCACGC CGCTGACGCT GATGCTGAGC
CCGCTCGAAG AAGTGATGAC CCAGGCGGCG CTGCCGGACG ATCAGCAGGC GCTGCTCGGG
ATCGCGCATC GCAACGGCTT GCGGTTGCTG AAGCTGGTCA ACACCCTGCT CGACTTCGCG
CGGATCGAGG CCGGCCGCGT CACTGCGCAG TTCACCCCGG TCGATCTGCC GTCCTTCACC
GCCGAACTCG CCTCCAACTT CCGCTCGGCC ATCGACAAGG CCGGACTACG GCTCATCATC
GATGCGCCAC CGCTGCCGCA GCCGGTCTAT GTCGACCGCG AGATGTGGGA GAAGATCGTC
CTCAATCTGC TGTCCAACGC CTTCAAGTTC ACCTTCGCGG GCGAGATCGC CGTGACGGTC
CGCGCCGGCC CGGACGGCCG CTCCGCCGAA ATCGTCGTCA GCGACACCGG CACCGGCATT
CCGCCGACCG AAATCCCGCA TCTGTTCGAA CGCTTCCGCC GGGTCGAAGG CGCGCGCGGC
CGCTCGATCG AGGGCAGCGG CATCGGGCTC GCGCTGGTGC AGGAACTGGT CAAGCTGCAC
AGCGGCAGCC TCAGCGTCGA GAGCGAACTC GGCCGCGGCA GCGCGTTCCG CGTCACATTG
CCGTTCGGCG CCGCGCATTT GCCAGCCGAA CGCCCGCAGC ATTCTGCTTT GCAGATCTCC
ACCAATGTCC GCGCCCAGGT CTATCTCGAC GAAGCGATGG GCTGGCTGCA GGGTGAAGGT
GACGCCGAAA TCGACGCCGG TCGACCGCAC GCCTCCACGG CGGAGGATCT CGGATTCGGC
GCAAGCCGCG GCGGCGTGGC GCGCCCCCGC GTCCTGCTCG CCGACGACAA CCCCGACATG
CGCGACTACG TCGCCCGCCT GCTCGGCGAG AGCTACGAGG TCGACGCGGT CGGCGACGGC
GTCGCGGCGC TGGAGGCGGC GTGGAAGCAG CGGCCGGATC TGGTGATCTC CGACATCATG
ATGCCGCGGC TCGACGGGCT GAGCCTGCTG AAGGCACTGC GCAACGATTC CACGCTCGCC
GATGTGCCGG TGATCTTCCT CTCCGCCCGC GCCGGCGAAG AAGCGAGGGT CGAGGGACTC
GAGGCCGGCG CCGACGACTA TCTCAGCAAG CCGTTCAGCG CCCGCGAATT GCTGGCGCGG
GTGCGTTCAA ATCTCGACAT CGCCGAGGTG CGGCGCGAGG CGCTGCGCAC CGAGCACGCG
TTGCGGCAGG AGGCGCAGGC GGCGCGCGAA CGCGCCGAAG GCATCCTCGC CAGCATCAGC
GACGGCTTCA TCGCGCTCGA CGGCGATTTC CGCTTCACCT ACGTCAACGC CGCCGCCGAG
CGGCTGATGC GTCGCCCTGC CGCCGAGCTG CTCGGCAAGA AGTACTGGGA GGTCTATCCG
GCGATGGCCG GCACGATGAT CGAGCGCAGC TATCGCAGTG CCATGACCGA CCGGATCGGC
GCCGAATTCG AAAGCTACCA TCCGCCGAGC AAGCGCTGGT TTCACCTGCG CGTGTCGCCG
ACCAACGGTC AGAGCATCTC GGTCTATTTC CGCGACATCA CCGATCGCAA GCGGGCTGTC
GCGGCGCTGC GCGAACTCAA CGACCAGCTC GAGGAACAGG TCGCCGAGCG CACCGCCGAG
CTGCGGCAGA AGGAAGCGCG GCTGCGCACC ATCTTCGCCG CAAGCTACAC CTATCAGGCG
CTGCTGGCGC TCGACGGCAC GCTGATCGAC GCCAACCTCA CCTCGCTGTC CGGGATCGAC
GCGAAGCTCG AGGACATCGT CGGCAAGCCG CTGTGGGAAA CCCCGTGGAT CGTCGGTACG
CCGGGCATGT CGGAGATGAT CCGCGATGCG GTGGCGGCGG TCGCCGCCGG AGAGACGGTG
CGGCGCGAAC TGCACATCAA TTTGCCGGTC GGCGGCTGGC GCTGGTTCGA CTTCCAGATG
CGTCCGGTCC ACGACGCGCA GGGCCAAGTC ATCGCGATCG TGCCGGAGGC GGTCGAGATC
ACCGAGCGGC GCAAGGCCGA AGAGGCGTTC CGTCAGGCGC AGAAGATGGA GGCGATCGGC
CAGCTCACCG GCGGGGTCGC GCACGACTTC AACAATCTGC TGACCGTGAT CCGCTCCTCC
GCCGACCTGT TGCGCCGGCG CGAATTGCCG CCGGATCGGA TGCGCCGCTA TGTCGATGCG
ATCTCCGACA CCGCTGACCG CGCCGCCAAG CTGACCGGCC AGCTTCTCAC CTTCGCGCGC
CGCCACGCCC AGAACCGCCA GGTGTTCGAC GCGGCCCACC AGATCGAGCA GATCGCCGAG
ATGCTGAAGA CTGCGCTCGG CTCGCGCGCG AGCTTCGCGC TGACGGTCGC CGAGCGGCCC
CTCGCGGTCG AGGCCGACGC CAACCAGTTC GACGCGGCGC TGGTCAATCT GGTCGCCAAC
GCCCGCGATG CGATGGACGG CCAGGGCGCG CTGGAAATCC GCGTCGCACG GGCCAGCCCG
ACCGCGCAGG AAACCGCCGC GGGTATCGAG GGGGTCGTCG CGGTGTCGAT CGCCGACACC
GGCTCCGGCA TCCCGCCGGA CAAGATCGAC CGCATCTTCG AGCCGTTCTT CACCACCAAG
GAGATCGGCC GCGGCACCGG TCTCGGCCTG TCGCAGGTCT ATGGTTTCGC CAAGCAATCC
GGCGGCAACG TCACCGTCGA CAGCGAGGTC GGCGCCGGCA CCACCATCAC GCTGCGGCTG
CCGCTCAGCG CCAAGCCGAT CGAAGCCCGC GAGCGTACGC TGAGCGGCGA GACCGGCAAG
TCGCAGGAGC GCAGCTGCGT GCTCGTGGTG GAAGATAATT CCGAGGTGGG AGAATTCTCG
ACGCAATTGC TGCACGACCT CGGCTACGAG ACGGTGCTGG CGTCGAGCGC CGAGCAGGCG
CTGAAACTGC TCGATCAGGA CGCCGACCGG TTCAACATCG TGCTCAGCGA CGTGGTGATG
CCCGGCATGG ACGGCGTCGC GCTCGGCCGT GAAATCAGGA AGCGCCTGCC GAACCTCCCG
GTCGTCCTCA ATTCCGGCTA CGCCCACGTG CTGGCCGACG ACGGCCATCA CGGCTTCGAA
CTGCTGCACA AGCCGTATTC GGTCGAGGAC CTTTCGAAGG TGCTGCGCCG GGCGATGACG
GAGAGCCGCC GGGCGCTGAC CTGA
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| Protein sequence | MADVEWPGSS PGRGAAGHET LFLGRSELTS LLRRFDWAAT PLGPPEQWPQ ALKTAVRIML
TSQQPIWIGW GEQLTYFYND PYKAIIGGKH PWALGRPTRE VWHEIWDDIG PLLAKAMGGD
EGTYVEAQLL IMERNGFPEE TYYTFSYSPI PTDDGSAGGI FCANTDDTQR VISERQLSLL
RELASNAAQS RTVAQACEST AKALATDPRD LPFAMIYLME PGGSSVRLAA SAGIDADHPG
VKPVLSLVDG AECWPLAEAL RFNEPRLLRD LSAQFGFDFP AGGWRQPPSQ AIVLPIPSSG
DTGQPGFLIA GLNPFRLYDA TYRDFFTLVA AQIAAAVTNG DAYEEERRRA EALAEIDRAK
TAFFSNVSHE FRTPLTLMLS PLEEVMTQAA LPDDQQALLG IAHRNGLRLL KLVNTLLDFA
RIEAGRVTAQ FTPVDLPSFT AELASNFRSA IDKAGLRLII DAPPLPQPVY VDREMWEKIV
LNLLSNAFKF TFAGEIAVTV RAGPDGRSAE IVVSDTGTGI PPTEIPHLFE RFRRVEGARG
RSIEGSGIGL ALVQELVKLH SGSLSVESEL GRGSAFRVTL PFGAAHLPAE RPQHSALQIS
TNVRAQVYLD EAMGWLQGEG DAEIDAGRPH ASTAEDLGFG ASRGGVARPR VLLADDNPDM
RDYVARLLGE SYEVDAVGDG VAALEAAWKQ RPDLVISDIM MPRLDGLSLL KALRNDSTLA
DVPVIFLSAR AGEEARVEGL EAGADDYLSK PFSARELLAR VRSNLDIAEV RREALRTEHA
LRQEAQAARE RAEGILASIS DGFIALDGDF RFTYVNAAAE RLMRRPAAEL LGKKYWEVYP
AMAGTMIERS YRSAMTDRIG AEFESYHPPS KRWFHLRVSP TNGQSISVYF RDITDRKRAV
AALRELNDQL EEQVAERTAE LRQKEARLRT IFAASYTYQA LLALDGTLID ANLTSLSGID
AKLEDIVGKP LWETPWIVGT PGMSEMIRDA VAAVAAGETV RRELHINLPV GGWRWFDFQM
RPVHDAQGQV IAIVPEAVEI TERRKAEEAF RQAQKMEAIG QLTGGVAHDF NNLLTVIRSS
ADLLRRRELP PDRMRRYVDA ISDTADRAAK LTGQLLTFAR RHAQNRQVFD AAHQIEQIAE
MLKTALGSRA SFALTVAERP LAVEADANQF DAALVNLVAN ARDAMDGQGA LEIRVARASP
TAQETAAGIE GVVAVSIADT GSGIPPDKID RIFEPFFTTK EIGRGTGLGL SQVYGFAKQS
GGNVTVDSEV GAGTTITLRL PLSAKPIEAR ERTLSGETGK SQERSCVLVV EDNSEVGEFS
TQLLHDLGYE TVLASSAEQA LKLLDQDADR FNIVLSDVVM PGMDGVALGR EIRKRLPNLP
VVLNSGYAHV LADDGHHGFE LLHKPYSVED LSKVLRRAMT ESRRALT
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