More than 300 homologs were found in PanDaTox collection
for query gene Cyan7425_1327 on replicon NC_011884
Organism: Cyanothece sp. PCC 7425



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011884  Cyan7425_1327  3-isopropylmalate dehydratase, small subunit  100 
 
 
197 aa  401  1e-111  Cyanothece sp. PCC 7425  Bacteria  normal  0.507856  normal  0.452578 
 
 
-
 
NC_013161  Cyan8802_3810  isopropylmalate isomerase small subunit  67.35 
 
 
197 aa  284  5e-76  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_3761  isopropylmalate isomerase small subunit  67.35 
 
 
197 aa  284  5e-76  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_3629  isopropylmalate isomerase small subunit  63.08 
 
 
206 aa  279  2e-74  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_3966  isopropylmalate isomerase small subunit  61.73 
 
 
202 aa  271  4.0000000000000004e-72  Anabaena variabilis ATCC 29413  Bacteria  normal  0.05677  normal  0.0175805 
 
 
-
 
NC_014248  Aazo_5027  3-isopropylmalate dehydratase small subunit  62.24 
 
 
201 aa  266  1e-70  'Nostoc azollae' 0708  Bacteria  normal  0.162476  n/a   
 
 
-
 
NC_007604  Synpcc7942_2548  isopropylmalate isomerase small subunit  60.2 
 
 
202 aa  238  2.9999999999999997e-62  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0488432  normal 
 
 
-
 
NC_007335  PMN2A_1621  3-isopropylmalate dehydratase, small subunit  53.12 
 
 
206 aa  227  8e-59  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_03331  3-isopropylmalate dehydratase small subunit  53.12 
 
 
206 aa  227  1e-58  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_008816  A9601_02771  3-isopropylmalate dehydratase small subunit  50 
 
 
207 aa  221  4.9999999999999996e-57  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.385201  n/a   
 
 
-
 
NC_007577  PMT9312_0257  3-isopropylmalate dehydratase, small subunit  50.51 
 
 
207 aa  219  1.9999999999999999e-56  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.420219  n/a   
 
 
-
 
NC_007516  Syncc9605_0257  3-isopropylmalate dehydratase, small subunit  51.31 
 
 
204 aa  213  9.999999999999999e-55  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008817  P9515_02881  3-isopropylmalate dehydratase small subunit  48.95 
 
 
206 aa  213  9.999999999999999e-55  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.130398  n/a   
 
 
-
 
NC_008820  P9303_24681  3-isopropylmalate dehydratase small subunit  51.04 
 
 
210 aa  213  1.9999999999999998e-54  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_012029  Hlac_0871  3-isopropylmalate dehydratase, small subunit  49.22 
 
 
217 aa  207  1e-52  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_007513  Syncc9902_2087  3-isopropylmalate dehydratase small subunit  50.26 
 
 
204 aa  206  2e-52  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_02781  3-isopropylmalate dehydratase small subunit  47.45 
 
 
212 aa  206  2e-52  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_0321  3-isopropylmalate dehydratase, small subunit  49.25 
 
 
203 aa  204  5e-52  Planctomyces limnophilus DSM 3776  Bacteria  hitchhiker  0.00352929  n/a   
 
 
-
 
NC_009976  P9211_02811  3-isopropylmalate dehydratase small subunit  46.35 
 
 
207 aa  200  9.999999999999999e-51  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_0900  3-isopropylmalate dehydratase, small subunit  47.21 
 
 
223 aa  199  1.9999999999999998e-50  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013158  Huta_0643  3-isopropylmalate dehydratase, small subunit  44.39 
 
 
206 aa  197  1.0000000000000001e-49  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_013743  Htur_2764  3-isopropylmalate dehydratase, small subunit  45.41 
 
 
211 aa  195  4.0000000000000005e-49  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013202  Hmuk_2657  3-isopropylmalate dehydratase, small subunit  46.23 
 
 
214 aa  188  5.999999999999999e-47  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_010571  Oter_2681  isopropylmalate isomerase small subunit  43.88 
 
 
201 aa  186  2e-46  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1847  3-isopropylmalate dehydratase small subunit  44.33 
 
 
201 aa  185  4e-46  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1602  3-isopropylmalate dehydratase, small subunit  42.27 
 
 
201 aa  178  4e-44  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0187865 
 
 
-
 
NC_010655  Amuc_0667  isopropylmalate isomerase small subunit  41.24 
 
 
202 aa  171  6.999999999999999e-42  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1545  aconitate hydratase domain protein  44.5 
 
 
209 aa  161  6e-39  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.831045  n/a   
 
 
-
 
NC_010505  Mrad2831_0963  isopropylmalate isomerase small subunit  35 
 
 
200 aa  129  3e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4233  isopropylmalate isomerase small subunit  39.79 
 
 
201 aa  126  3e-28  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_0474  isopropylmalate isomerase small subunit  39.69 
 
 
201 aa  124  7e-28  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0372  isopropylmalate isomerase small subunit  35.82 
 
 
201 aa  124  1e-27  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3758  isopropylmalate isomerase small subunit  40.41 
 
 
201 aa  124  1e-27  Shewanella sp. ANA-3  Bacteria  normal  normal  0.113881 
 
 
-
 
NC_011205  SeD_A0119  isopropylmalate isomerase small subunit  37.31 
 
 
201 aa  123  2e-27  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A0126  isopropylmalate isomerase small subunit  37.37 
 
 
201 aa  122  2e-27  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.899902  normal  0.029238 
 
 
-
 
NC_009052  Sbal_0389  isopropylmalate isomerase small subunit  41.75 
 
 
201 aa  123  2e-27  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A0122  isopropylmalate isomerase small subunit  36.36 
 
 
201 aa  122  3e-27  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.14126  normal  0.46492 
 
 
-
 
NC_011083  SeHA_C0121  isopropylmalate isomerase small subunit  36.87 
 
 
201 aa  122  4e-27  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.886111  normal  0.157977 
 
 
-
 
NC_011149  SeAg_B0126  isopropylmalate isomerase small subunit  36.87 
 
 
201 aa  122  4e-27  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0296  isopropylmalate isomerase small subunit  37.1 
 
 
201 aa  122  4e-27  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.447651 
 
 
-
 
NC_011757  Mchl_0340  isopropylmalate isomerase small subunit  37.1 
 
 
201 aa  122  4e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0400  isopropylmalate isomerase small subunit  40.72 
 
 
201 aa  121  5e-27  Shewanella baltica OS195  Bacteria  normal  hitchhiker  0.000488217 
 
 
-
 
NC_011663  Sbal223_0414  isopropylmalate isomerase small subunit  40.72 
 
 
201 aa  121  5e-27  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000110574 
 
 
-
 
NC_009665  Shew185_0388  isopropylmalate isomerase small subunit  40.72 
 
 
201 aa  121  5e-27  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0371  isopropylmalate isomerase small subunit  39.9 
 
 
201 aa  122  5e-27  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3585  isopropylmalate isomerase small subunit  39.9 
 
 
201 aa  121  6e-27  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4440  3-isopropylmalate dehydratase, small subunit  38.12 
 
 
196 aa  120  9e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_00073  isopropylmalate isomerase small subunit  37.13 
 
 
201 aa  120  9.999999999999999e-27  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3527  3-isopropylmalate dehydratase, small subunit  37.13 
 
 
201 aa  120  9.999999999999999e-27  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0076  isopropylmalate isomerase small subunit  37.13 
 
 
201 aa  120  9.999999999999999e-27  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0076  isopropylmalate isomerase small subunit  36.87 
 
 
201 aa  120  9.999999999999999e-27  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.28946 
 
 
-
 
NC_009801  EcE24377A_0074  isopropylmalate isomerase small subunit  37.13 
 
 
201 aa  120  9.999999999999999e-27  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0065  isopropylmalate isomerase small subunit  37.13 
 
 
201 aa  120  9.999999999999999e-27  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3586  isopropylmalate isomerase small subunit  37.13 
 
 
201 aa  120  9.999999999999999e-27  Escherichia coli ATCC 8739  Bacteria  normal  hitchhiker  0.0000223756 
 
 
-
 
NC_012892  B21_00072  hypothetical protein  37.13 
 
 
201 aa  120  9.999999999999999e-27  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3743  3-isopropylmalate dehydratase, small subunit  38.27 
 
 
201 aa  119  3e-26  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_0742  isopropylmalate isomerase small subunit  37.89 
 
 
200 aa  119  3.9999999999999996e-26  Serratia proteamaculans 568  Bacteria  normal  0.843634  normal 
 
 
-
 
NC_008700  Sama_0338  isopropylmalate isomerase small subunit  38.97 
 
 
201 aa  118  4.9999999999999996e-26  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00370617  normal  0.442563 
 
 
-
 
NC_012912  Dd1591_0591  isopropylmalate isomerase small subunit  36.84 
 
 
200 aa  117  7e-26  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3269  isopropylmalate isomerase small subunit  38.06 
 
 
209 aa  117  9e-26  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4211  3-isopropylmalate dehydratase, small subunit  34.17 
 
 
198 aa  117  9.999999999999999e-26  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0863  isopropylmalate isomerase small subunit  37.56 
 
 
212 aa  117  9.999999999999999e-26  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000359889  hitchhiker  0.000927879 
 
 
-
 
NC_011353  ECH74115_0078  isopropylmalate isomerase small subunit  36.82 
 
 
201 aa  117  9.999999999999999e-26  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0279  3-isopropylmalate dehydratase, small subunit  34.04 
 
 
195 aa  117  9.999999999999999e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0619  isopropylmalate isomerase small subunit  34.85 
 
 
201 aa  117  9.999999999999999e-26  Enterobacter sp. 638  Bacteria  normal  normal  0.12131 
 
 
-
 
NC_009512  Pput_5021  3-isopropylmalate dehydratase, small subunit  35.53 
 
 
214 aa  117  9.999999999999999e-26  Pseudomonas putida F1  Bacteria  normal  0.447275  normal 
 
 
-
 
NC_009708  YpsIP31758_3408  isopropylmalate isomerase small subunit  38.92 
 
 
200 aa  116  1.9999999999999998e-25  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2939  isopropylmalate isomerase small subunit  38.38 
 
 
200 aa  116  1.9999999999999998e-25  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_3538  isopropylmalate isomerase small subunit  38.38 
 
 
200 aa  116  1.9999999999999998e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0374  isopropylmalate isomerase small subunit  37.88 
 
 
200 aa  115  3.9999999999999997e-25  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_0389  isopropylmalate isomerase small subunit  35.05 
 
 
200 aa  115  5e-25  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0827  isopropylmalate isomerase small subunit  33.83 
 
 
211 aa  115  6e-25  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0883  isopropylmalate isomerase small subunit  33.83 
 
 
201 aa  114  7.999999999999999e-25  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0629  isopropylmalate isomerase small subunit  36.32 
 
 
200 aa  114  1.0000000000000001e-24  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3798  isopropylmalate isomerase small subunit  37.7 
 
 
200 aa  113  1.0000000000000001e-24  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0396  isopropylmalate isomerase small subunit  37.75 
 
 
201 aa  114  1.0000000000000001e-24  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000184497 
 
 
-
 
NC_008345  Sfri_3817  isopropylmalate isomerase small subunit  37.95 
 
 
201 aa  114  1.0000000000000001e-24  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1548  isopropylmalate isomerase small subunit  35.64 
 
 
204 aa  113  2.0000000000000002e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.165609  normal  0.0663452 
 
 
-
 
NC_002977  MCA2064  isopropylmalate isomerase small subunit  40.25 
 
 
212 aa  112  2.0000000000000002e-24  Methylococcus capsulatus str. Bath  Bacteria  normal  0.851734  n/a   
 
 
-
 
NC_009523  RoseRS_1960  isopropylmalate isomerase small subunit  34.65 
 
 
204 aa  113  2.0000000000000002e-24  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_2521  isopropylmalate isomerase small subunit  33.51 
 
 
201 aa  113  2.0000000000000002e-24  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0588786  normal 
 
 
-
 
NC_007493  RSP_0862  isopropylmalate isomerase small subunit  33.51 
 
 
201 aa  113  2.0000000000000002e-24  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1446  3-isopropylmalate dehydratase, small subunit  39.87 
 
 
215 aa  113  2.0000000000000002e-24  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.00452839  normal  0.703119 
 
 
-
 
NC_011989  Avi_4358  isopropylmalate isomerase small subunit  35.11 
 
 
201 aa  113  2.0000000000000002e-24  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1246  isopropylmalate isomerase small subunit  40.4 
 
 
204 aa  112  2.0000000000000002e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0195  3-isopropylmalate dehydratase, small subunit  34.55 
 
 
197 aa  112  2.0000000000000002e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010682  Rpic_1382  3-isopropylmalate dehydratase, small subunit  39.87 
 
 
215 aa  113  2.0000000000000002e-24  Ralstonia pickettii 12J  Bacteria  normal  0.758839  normal  0.419844 
 
 
-
 
NC_010506  Swoo_4547  isopropylmalate isomerase small subunit  38.22 
 
 
201 aa  112  2.0000000000000002e-24  Shewanella woodyi ATCC 51908  Bacteria  normal  0.258236  normal  0.011903 
 
 
-
 
NC_010511  M446_0040  isopropylmalate isomerase small subunit  33 
 
 
200 aa  112  4.0000000000000004e-24  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00442875 
 
 
-
 
NC_010338  Caul_0215  isopropylmalate isomerase small subunit  42.07 
 
 
202 aa  112  5e-24  Caulobacter sp. K31  Bacteria  normal  normal  0.20437 
 
 
-
 
NC_011138  MADE_03088  isopropylmalate isomerase small subunit  35.26 
 
 
201 aa  112  5e-24  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00814  isopropylmalate isomerase small subunit  35.53 
 
 
200 aa  112  5e-24  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_001659  3-isopropylmalate dehydratase small subunit  35.53 
 
 
200 aa  111  6e-24  Vibrio sp. Ex25  Bacteria  normal  0.57325  n/a   
 
 
-
 
NC_009428  Rsph17025_0159  isopropylmalate isomerase small subunit  33.51 
 
 
201 aa  111  6e-24  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.949563  normal 
 
 
-
 
NC_009675  Anae109_1876  isopropylmalate isomerase small subunit  36.22 
 
 
192 aa  111  7.000000000000001e-24  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.104175 
 
 
-
 
NC_008228  Patl_3271  isopropylmalate isomerase small subunit  35.57 
 
 
208 aa  111  9e-24  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1424  3-isopropylmalate dehydratase, small subunit  32.47 
 
 
201 aa  110  1.0000000000000001e-23  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1979  isopropylmalate isomerase small subunit  37.63 
 
 
191 aa  110  1.0000000000000001e-23  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3610  isopropylmalate isomerase small subunit  37.17 
 
 
200 aa  110  1.0000000000000001e-23  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.607492  n/a   
 
 
-
 
NC_007947  Mfla_1704  isopropylmalate isomerase small subunit  39.87 
 
 
214 aa  110  1.0000000000000001e-23  Methylobacillus flagellatus KT  Bacteria  normal  0.045793  hitchhiker  0.00210823 
 
 
-
 
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