| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3758 |
|---|
| Symbol | leuD |
|---|
| ID | 4479968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 4516774 |
|---|
| End bp | 4517379 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639728371 |
|---|
| Product | isopropylmalate isomerase small subunit |
|---|
| Protein accession | YP_871382 |
|---|
| Protein GI | 117922190 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
|---|
| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.113881 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCTT TTACTAGCCA TACCGGGCTT GCGGTCATGA TCGACAGCGC CAATATCGAT
ACCGATCAAA TTATCCCGAA GCAATTTTTA TCTAAGGTGA CACGGGATGG ATTCGGTGTG
CATTTATTCC ACGACTGGCG TTATCTCGAT GATGCCGGGG AAGTGCCTAA TCCTGATTTT
ACTCTAAACA AACCTCGCTA TAGCGGTGCG TCGATTCTGC TGGCACAGGA AAACTTTGGC
TGTGGCTCCA GCCGTGAACA CGCCCCATGG GCACTGGCGG ATTTTGGCCT GCGCGCCATT
ATCGCTCCGA GCTTTGCCGA TATTTTTTAT GGAAACTCCA TCAATAACGG TTTGTTGCCA
GTGAAGCTGA GCGCGAATGA AGTGCGTCAG TTAATGGATG AGGTGGCGAG CGAAGAAGGC
GCACAAATCA CCGTGGACTT AACGACTTGT AAGGTGACAT CGCCTTTGGG AGCTGAGTTT
AGCTTTACGT TGGCCGAGTC GGCGCGGCAT AAATTGCTGA ATGGTTTAGA TGCCATTGGC
TTGACCTTGT CCCACGGAAT TCAGATAGGC GAGTACGAAT CACAAATCCC AAGCTGGCGA
TGCTAA
|
|---|
| Protein sequence | MQPFTSHTGL AVMIDSANID TDQIIPKQFL SKVTRDGFGV HLFHDWRYLD DAGEVPNPDF
TLNKPRYSGA SILLAQENFG CGSSREHAPW ALADFGLRAI IAPSFADIFY GNSINNGLLP
VKLSANEVRQ LMDEVASEEG AQITVDLTTC KVTSPLGAEF SFTLAESARH KLLNGLDAIG
LTLSHGIQIG EYESQIPSWR C
|
|---|
| |