Gene SO_4233 details

Gene Information

• Locus tag: SO_4233
• Symbol: leuD
• ID: 1171838
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 4410417
• End bp: 4411022
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637345960
• Product: isopropylmalate isomerase small subunit
• Protein accession: NP_719760
• Protein GI: 24375717
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACCTT TTACTTGCCA TACCGGGCTT GCGGTGATGA TCGATAGTGC GAATATCGAT 
ACGGATCAGA TTATTCCGAA ACAATTTTTA TCTAAGGTGA CCCGCGATGG ATTCGGCGTG 
CACTTATTTC ACGATTGGCG TTATCTCGAT GATGCGGGAG ATGTGCCAAA CCCTGAGTTC 
ACCCTAAACA AACCTCGCTA TAACGGTGCT TCGATTCTGC TGGCGCAGGA AAACTTTGGC 
TGTGGCTCTA GCCGTGAACA CGCCCCGTGG GCATTGGCTG ATTTTGGCCT GCGCGCCATT 
ATCGCCCCCA GTTTTGCTGA TATTTTTTAT GGTAACTCAA TCAATAACGG TTTATTGCCA 
GTAAAGCTGA GCGCGAATGA AGTGCGTCAG TTAATGGATG AGGTGGCGAG CGAAGAAGGC 
GCACAAATCA CCGTCGATTT AACCACTTGT CAGGTGACAT CACCTTCTGG TGCTCAGTTT 
AGCTTTAGTC TGGCGGAGTC AGCGCGCCAC AAATTGCTGA ATGGTCTAGA CGCTATAGGC 
TTGACCTTAT CTCACGGGGC GCAAATTAGT GAGTACGAGT CACAGATCCC AAGTTGGCGA 
CGCTGA 

 

Protein sequence

MQPFTCHTGL AVMIDSANID TDQIIPKQFL SKVTRDGFGV HLFHDWRYLD DAGDVPNPEF 
TLNKPRYNGA SILLAQENFG CGSSREHAPW ALADFGLRAI IAPSFADIFY GNSINNGLLP 
VKLSANEVRQ LMDEVASEEG AQITVDLTTC QVTSPSGAQF SFSLAESARH KLLNGLDAIG 
LTLSHGAQIS EYESQIPSWR R