Gene Mext_0296 details

Gene Information

• Locus tag: Mext_0296
• Symbol: leuD
• ID: 5832456
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium extorquens PA1
• Kingdom: Bacteria
• Replicon accession: NC_010172
• Strand: +
• Start bp: 332554
• End bp: 333159
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 641366081
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001637791
• Protein GI: 163849748
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 35
• Fosmid unclonability p-value: 0.447651
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAAAAGT TCACGACCCT GGAGGGCGTC GCCGCGCCCA TGCGGATCAT CAACATCGAT 
ACCGACCGCA TCATCCCCAA GCAGTATCTC AAGACGATCA AGCGCACCGG GCTCGGCCAG 
GGCCTGTTCT CGGAAATGCG CTACAACGAC GACGGCTCGG AGAATCCCGA TTTCGTCCTC 
AACCAGCCGG CCTACCGCCA CGCCAAGACC CTCGTGGTCG GCGACAATTT CGGCTGTGGC 
TCCTCGCGCG AGCACGCGCC CTGGGCGCTG GCCGATTTCG GCATCCGCTG CGTGATCTCG 
ACGAGCTTCG CCGACATCTT CTTCAACAAC TGCGCCAAGA ACGGCATCCT CGCGATCGTC 
GTCTCGCCGG AGGATCTGGA GAAGCTGTTC CAGGACGCGG AGCGCGGCGC CAACGCGACG 
CTGACGATCG ATCTGGCGGC GCAGACCATC AAGGGCCCGG ACGGCGGCAC CCTGCATTTC 
GACATCGACG AGGGTCGCAA GCACAACCTG CTCAACGGCC TCGACGAGAT CGGTCTCACG 
CTCGACCAGA AGGCTCCAGC GATCGACGCC TACGAGGCGA AGCTCGCTCA GCGCGAATGG 
GCCTGA 

 

Protein sequence

MEKFTTLEGV AAPMRIINID TDRIIPKQYL KTIKRTGLGQ GLFSEMRYND DGSENPDFVL 
NQPAYRHAKT LVVGDNFGCG SSREHAPWAL ADFGIRCVIS TSFADIFFNN CAKNGILAIV 
VSPEDLEKLF QDAERGANAT LTIDLAAQTI KGPDGGTLHF DIDEGRKHNL LNGLDEIGLT 
LDQKAPAIDA YEAKLAQREW A