Gene Avi_4358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_4358 
SymbolleuD 
ID7387935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp3673325 
End bp3673930 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content55% 
IMG OID643653005 
Productisopropylmalate isomerase small subunit 
Protein accessionYP_002551176 
Protein GI222150219 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGT TCACGAAGCT CACCGGGGTC GCGGCACCGC TGCCGGTCGT CAATATCGAT 
ACGGATATGA TCATTCCGAA GGATTACCTG AAGACGATCA AGCGCACTGG CCTTGGAACA
GGCCTGTTTG CCGAAGCCCG CTATCATCAG GATGGCTCGA TCAATCAGGA TTTCGTGCTC
AACAAACCAG CCTATCAAAA CGCCAAGATC CTGGTCGCTG GCGATAATTT TGGCTGCGGC
TCCTCGCGTG AACATGCGCC TTGGGCTTTG CTGGATTTCG GCATCCGTTG CGTGATCTCC
ACCAGCTTTG CCGATATTTT CTACAATAAC TGTTTCAAGA ACGGCATTCT GCCGATCGTC
GTCAGCCAGG AAAACCTGGA AAAGCTGATG GACGACGCGC AGCGCGGCTC CAACGCTGTG
GTGACCGTGG ATCTGGAAAC CCAGGAAATC ACCGGCCCGG ATGGTGGCAG CATCAGCTTC
GAAATCGATG AATTCAAGCG CCATTGCATG TTGAACGGCC TCGATGACAT CGGCCTCACC
ATGGAAAAAT CCAGCGCGAT TGCTTCGTTC GAGACGGCCA ACGCCGCATC GCGCCCCTGG
GCCTGA
 
Protein sequence
MEKFTKLTGV AAPLPVVNID TDMIIPKDYL KTIKRTGLGT GLFAEARYHQ DGSINQDFVL 
NKPAYQNAKI LVAGDNFGCG SSREHAPWAL LDFGIRCVIS TSFADIFYNN CFKNGILPIV
VSQENLEKLM DDAQRGSNAV VTVDLETQEI TGPDGGSISF EIDEFKRHCM LNGLDDIGLT
MEKSSAIASF ETANAASRPW A