Gene CPS_4211 details

Gene Information

• Locus tag: CPS_4211
• Symbol: leuD
• ID: 3519667
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 4432648
• End bp: 4433244
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637286652
• Product: 3-isopropylmalate dehydratase, small subunit
• Protein accession: YP_270861
• Protein GI: 71278144
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAT TTAACACACA TACAGGTTTG GTTGTGCCAT TAGATGTTGC AAACGTCGAT 
ACGGATCAAA TCATCCCTAA GCAGTTTTTA CAAAAAACTG AACGCGTAGG TTTTGGCGTG 
CATTTATTTC ACGATAGTCG CTACTTAGAT CATGATGGCA CGCAGGAAAA TCCTGATTTT 
GTCATCAACA AGCCAGAATA TAAAGGCGCT AGTATTTTAT TAGCCGGTGA AAACTTTGGC 
TGTGGTTCAA GTCGTGAACA TGCACCTTGG GCACTACAAG AATATGGCTT TAAAGTCATC 
ATAGCATCAA GTTTTGCTGA TATTTTTTAT GGTAACTGTA TCAACGTTGG CCTGTTACCG 
ATTAAGTTGA CTGAAGCTGA AATTGAGCAG TTATTCAAAT TATCTCCTAA CGCCCAACTA 
ACGCTGACTG TTGATTTACC AAATAATGTT GTAACTTGTG GCGAATTATC TTTTAAGTTT 
AGCTTGAATG AATTTCAACA ATATAGTTTA GAAAATGGTG TTGATAGTGT CGGTTGGACG 
TTAAATAAAC TTGATACCAT CAAAGCCTTT GAAGAGAAAA TGCCTGCGTG GCAATAA 

 

Protein sequence

MEKFNTHTGL VVPLDVANVD TDQIIPKQFL QKTERVGFGV HLFHDSRYLD HDGTQENPDF 
VINKPEYKGA SILLAGENFG CGSSREHAPW ALQEYGFKVI IASSFADIFY GNCINVGLLP 
IKLTEAEIEQ LFKLSPNAQL TLTVDLPNNV VTCGELSFKF SLNEFQQYSL ENGVDSVGWT 
LNKLDTIKAF EEKMPAWQ