| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1246 |
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| Symbol | leuD |
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| ID | 7266232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 1525097 |
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| End bp | 1525711 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643566088 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_002462590 |
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| Protein GI | 219848157 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACCAA TTTCAACGAT TACCGGTAAA GTGGTCGTCT TACCGGTTGA GAATATTGAC
ACCGATCAGA TTATTCCGGC GCGTTTTCTC AAAGTTACAG ACAAGAGTGG TTTGGCGGCG
GGGTTGTTTG AGGCATGGCG CTACCTACCC GATGGGACTC TCAACCCCGA TTTTCCGCTG
AATCGGCCGG AAGCAGCAGG AGCTACTATT CTCATTAGCG GTCGCAATTT TGGCTGCGGT
AGCTCACGTG AGCACGCGCC ATGGGCTTTG CAAGACTACG GTTTTCAAGC TGTGATCGCT
CCCTCGTTTG CCGACATTTT TCGGAATAAC GCGCTCAAGA TCGGGTTGTT GCCGGTAATG
GTCGAGCAGA GTGTCTACGA TGAGTTAGTG GTCATGTATG CGAATGACCC TTCCATGGTG
CTAACAATTG ATCTAGCAGC GCAGATCGTC GCCTTACCCG ATGGCCGGCA GGTACATTTT
CCTATCGATG CGTTTAGTAA GTATTGCCTG CTGCACGGAG TCGATCAGCT TGGCTTTTTG
CTCCAACAAG AAGCGGCGAT TGCGGCTTAC GAGGCAGCAC ACCCCCAGCC GGTGCAAACG
ACGGTACGCC GTTAA
|
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| Protein sequence | MEPISTITGK VVVLPVENID TDQIIPARFL KVTDKSGLAA GLFEAWRYLP DGTLNPDFPL
NRPEAAGATI LISGRNFGCG SSREHAPWAL QDYGFQAVIA PSFADIFRNN ALKIGLLPVM
VEQSVYDELV VMYANDPSMV LTIDLAAQIV ALPDGRQVHF PIDAFSKYCL LHGVDQLGFL
LQQEAAIAAY EAAHPQPVQT TVRR
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