More than 300 homologs were found in PanDaTox collection
for query gene CHU_0659 on replicon NC_008255
Organism: Cytophaga hutchinsonii ATCC 33406



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008255  CHU_0659  fimbrial Z protein; signal transducer  100 
 
 		 212 aa  430  1e-120  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.379451 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  35.81 
 
 		 215 aa  135  4e-31  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_008255  CHU_1317  response regulator  35.45 
 
 		 220 aa  132  3e-30  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  29.77 
 
 		 228 aa  122  5e-27  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal  1 
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  28.84 
 
 		 228 aa  121  8e-27  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  30 
 
 		 221 aa  117  9.999999999999999e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal  1 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  33.49 
 
 		 218 aa  116  1.9999999999999998e-25  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  34.16 
 
 		 206 aa  116  1.9999999999999998e-25  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  28.24 
 
 		 218 aa  117  1.9999999999999998e-25  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  28.64 
 
 		 217 aa  116  1.9999999999999998e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  33.49 
 
 		 218 aa  116  1.9999999999999998e-25  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009524  PsycPRwf_1429  two component LuxR family transcriptional regulator  30.77 
 
 		 211 aa  116  3e-25  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  0.85494 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  32.56 
 
 		 218 aa  114  6.9999999999999995e-25  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  31.65 
 
 		 221 aa  114  7.999999999999999e-25  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  30.77 
 
 		 206 aa  114  8.999999999999998e-25  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  29.91 
 
 		 216 aa  114  8.999999999999998e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  32.84 
 
 		 218 aa  114  1.0000000000000001e-24  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  31.07 
 
 		 219 aa  114  1.0000000000000001e-24  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_2293  LuxR family DNA-binding response regulator  32.86 
 
 		 211 aa  113  2.0000000000000002e-24  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS2109  LuxR family DNA-binding response regulator  32.2 
 
 		 209 aa  114  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_2048  response regulator  32.2 
 
 		 209 aa  114  2.0000000000000002e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.102554  n/a   
 
 
-
 
NC_006274  BCZK2046  response regulator  32.2 
 
 		 209 aa  114  2.0000000000000002e-24  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_2265  LuxR family DNA-binding response regulator  32.2 
 
 		 209 aa  114  2.0000000000000002e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.201191  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  30.52 
 
 		 221 aa  113  2.0000000000000002e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_011773  BCAH820_2290  DNA-binding response regulator, LuxR family  32.2 
 
 		 209 aa  114  2.0000000000000002e-24  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000736213 
 
 
-
 
NC_013440  Hoch_1846  two component transcriptional regulator, LuxR family  30.62 
 
 		 212 aa  112  3e-24  Haliangium ochraceum DSM 14365  Bacteria  normal  0.349565  normal  0.2019 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  30.56 
 
 		 237 aa  112  3e-24  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_011658  BCAH187_A2375  DNA-binding response regulator, LuxR family  33.17 
 
 		 209 aa  112  3e-24  Bacillus cereus AH187  Bacteria  normal  0.248491  n/a   
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  32.09 
 
 		 231 aa  112  3e-24  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  31.08 
 
 		 253 aa  112  5e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_1595  two component LuxR family transcriptional regulator  27.88 
 
 		 209 aa  112  5e-24  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00167261 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  28.99 
 
 		 209 aa  111  8.000000000000001e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_007204  Psyc_0703  LuxR family transcriptional regulator  30.62 
 
 		 211 aa  110  1.0000000000000001e-23  Psychrobacter arcticus 273-4  Bacteria  hitchhiker  0.000151408  normal  1 
 
 
-
 
NC_007969  Pcryo_0677  two component LuxR family transcriptional regulator  30.62 
 
 		 211 aa  110  1.0000000000000001e-23  Psychrobacter cryohalolentis K5  Bacteria  hitchhiker  0.00533706  normal  1 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  29.03 
 
 		 225 aa  110  2.0000000000000002e-23  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  32.13 
 
 		 234 aa  110  2.0000000000000002e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_013595  Sros_1229  response regulator receiver protein  30.23 
 
 		 212 aa  109  3e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  hitchhiker  0.00799583 
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  31.94 
 
 		 217 aa  109  3e-23  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011368  Rleg2_4527  two component transcriptional regulator, LuxR family  32.23 
 
 		 223 aa  109  3e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.658241 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  30.09 
 
 		 237 aa  109  3e-23  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  31.94 
 
 		 217 aa  109  3e-23  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_4437  two component transcriptional regulator, LuxR family  27.65 
 
 		 218 aa  108  4.0000000000000004e-23  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.784745  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  28.57 
 
 		 303 aa  109  4.0000000000000004e-23  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  29.82 
 
 		 236 aa  108  5e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  32.38 
 
 		 213 aa  108  6e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  27.14 
 
 		 219 aa  108  6e-23  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  28.85 
 
 		 213 aa  108  6e-23  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  32.24 
 
 		 216 aa  108  6e-23  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_04820  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  28.37 
 
 		 229 aa  108  7.000000000000001e-23  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.465009  normal  1 
 
 
-
 
NC_008825  Mpe_A0581  two component LuxR family transcriptional regulator  28.85 
 
 		 210 aa  108  7.000000000000001e-23  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  31.05 
 
 		 217 aa  108  8.000000000000001e-23  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  27.14 
 
 		 219 aa  108  8.000000000000001e-23  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_009441  Fjoh_4664  two component LuxR family transcriptional regulator  31.22 
 
 		 219 aa  108  8.000000000000001e-23  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  29.33 
 
 		 212 aa  107  9.000000000000001e-23  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.383896 
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  28.5 
 
 		 209 aa  107  1e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  28.91 
 
 		 210 aa  107  1e-22  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  29.91 
 
 		 227 aa  106  2e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  29.38 
 
 		 210 aa  107  2e-22  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006369  lpl2571  transmission activator LetA  30.48 
 
 		 219 aa  107  2e-22  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_1255  two component transcriptional regulator, LuxR family  29.63 
 
 		 219 aa  106  2e-22  Nakamurella multipartita DSM 44233  Bacteria  normal  0.490147  normal  0.40644 
 
 
-
 
NC_010505  Mrad2831_0320  two component LuxR family transcriptional regulator  28.57 
 
 		 221 aa  106  2e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.15389  normal  1 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  30.95 
 
 		 211 aa  107  2e-22  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  30.19 
 
 		 215 aa  106  2e-22  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  28.44 
 
 		 220 aa  107  2e-22  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  30 
 
 		 225 aa  106  2e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  31.08 
 
 		 234 aa  107  2e-22  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_006368  lpp2699  transmission activator LetA  30.48 
 
 		 219 aa  106  3e-22  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_014158  Tpau_0915  two component transcriptional regulator, LuxR family  28.97 
 
 		 223 aa  106  3e-22  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  31.8 
 
 		 222 aa  105  3e-22  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_3828  two component transcriptional regulator, LuxR family  28.02 
 
 		 220 aa  106  3e-22  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  28.43 
 
 		 216 aa  106  3e-22  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_008751  Dvul_0670  two component LuxR family transcriptional regulator  28.57 
 
 		 216 aa  106  3e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  0.267154  normal  1 
 
 
-
 
NC_013441  Gbro_3475  response regulator receiver  31.43 
 
 		 228 aa  105  4e-22  Gordonia bronchialis DSM 43247  Bacteria  normal  0.849127  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  25.24 
 
 		 212 aa  105  4e-22  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  31.7 
 
 		 226 aa  105  4e-22  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_008752  Aave_4382  two component LuxR family transcriptional regulator  27.88 
 
 		 209 aa  105  4e-22  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  26.44 
 
 		 210 aa  105  5e-22  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  28.91 
 
 		 210 aa  105  5e-22  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012854  Rleg_6399  two component transcriptional regulator, LuxR family  30.81 
 
 		 214 aa  105  6e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.139442 
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  31.4 
 
 		 213 aa  105  6e-22  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  28.91 
 
 		 210 aa  105  6e-22  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_3794  two component LuxR family transcriptional regulator  29.19 
 
 		 209 aa  105  6e-22  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_3068  two component transcriptional regulator, LuxR family  29.19 
 
 		 209 aa  105  6e-22  Acidovorax ebreus TPSY  Bacteria  normal  0.44153  n/a   
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  30.48 
 
 		 214 aa  105  6e-22  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  31.4 
 
 		 213 aa  105  6e-22  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  30.56 
 
 		 222 aa  105  7e-22  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_013061  Phep_2962  response regulator receiver  30.3 
 
 		 206 aa  105  7e-22  Pedobacter heparinus DSM 2366  Bacteria  normal  0.117851  normal  1 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  28.04 
 
 		 215 aa  104  8e-22  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_0563  two component LuxR family transcriptional regulator  27.88 
 
 		 209 aa  104  8e-22  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_2911  two component transcriptional regulator, LuxR family  31.4 
 
 		 209 aa  104  8e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  27.36 
 
 		 209 aa  104  9e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_013132  Cpin_2387  two component transcriptional regulator, LuxR family  30.92 
 
 		 207 aa  104  9e-22  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.132486  normal  0.384012 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  28.77 
 
 		 218 aa  104  9e-22  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  30.1 
 
 		 207 aa  104  1e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  29.17 
 
 		 218 aa  103  1e-21  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  29.22 
 
 		 242 aa  104  1e-21  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013172  Bfae_00310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.16 
 
 		 213 aa  103  1e-21  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  30.29 
 
 		 228 aa  104  1e-21  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008786  Veis_2180  two component LuxR family transcriptional regulator  29.19 
 
 		 209 aa  104  1e-21  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.876214 
 
 
-
 
NC_013510  Tcur_4226  two component transcriptional regulator, LuxR family  30.81 
 
 		 210 aa  104  1e-21  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
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