More than 300 homologs were found in PanDaTox collection
for query gene TC0538 on replicon NC_002620
Organism: Chlamydia muridarum Nigg



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002620  TC0538  integration host factor beta subunit, putative  100 
 
 		 100 aa  204  4e-52  Chlamydia muridarum Nigg  Bacteria  unclonable  0.00000418171  n/a   
 
 
-
 
NC_010655  Amuc_0281  histone family protein DNA-binding protein  42.27 
 
 		 101 aa  77  0.00000000000008  Akkermansia muciniphila ATCC BAA-835  Bacteria  unclonable  0.00000000512973  normal  1 
 
 
-
 
NC_007519  Dde_3213  histone-like DNA-binding protein  37.78 
 
 		 91 aa  70.5  0.000000000007  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_002977  MCA1411  integration host factor, beta subunit  36.36 
 
 		 95 aa  68.2  0.00000000003  Methylococcus capsulatus str. Bath  Bacteria  decreased coverage  0.00234399  n/a   
 
 
-
 
NC_008609  Ppro_1912  histone family protein DNA-binding protein  37.08 
 
 		 88 aa  66.2  0.0000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_3223  integration host factor, beta subunit  35.05 
 
 		 102 aa  65.1  0.0000000003  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00795206  normal  1 
 
 
-
 
NC_013171  Apre_0964  histone family protein DNA-binding protein  33.33 
 
 		 92 aa  64.7  0.0000000004  Anaerococcus prevotii DSM 20548  Bacteria  decreased coverage  0.00000000994236  n/a   
 
 
-
 
NC_008340  Mlg_0932  integration host factor subunit beta  35.96 
 
 		 100 aa  64.7  0.0000000004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.802461  normal  1 
 
 
-
 
NC_010514  Mrad2831_6375  histone family protein DNA-binding protein  33.7 
 
 		 108 aa  64.3  0.0000000005  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    n/a   
 
 
-
 
NC_010517  Mrad2831_6405  histone family protein DNA-binding protein  33.7 
 
 		 108 aa  64.3  0.0000000005  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal  1 
 
 
-
 
NC_010002  Daci_4725  integration host factor, beta subunit  32.61 
 
 		 113 aa  64.3  0.0000000006  Delftia acidovorans SPH-1  Bacteria  normal  0.929388  normal  1 
 
 
-
 
NC_011206  Lferr_1026  integration host factor, beta subunit  35.11 
 
 		 101 aa  63.9  0.0000000007  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  hitchhiker  0.00129538  unclonable  0.0000000000260989 
 
 
-
 
NC_011761  AFE_0905  integration host factor, beta subunit  35.11 
 
 		 101 aa  63.9  0.0000000007  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.809702  n/a   
 
 
-
 
NC_012791  Vapar_1613  integration host factor, beta subunit  32.63 
 
 		 104 aa  63.5  0.0000000008  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_0397  histone family protein DNA-binding protein  34.44 
 
 		 91 aa  63.5  0.0000000008  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  0.146494 
 
 
-
 
NC_008576  Mmc1_2063  histone family protein DNA-binding protein  32.97 
 
 		 91 aa  62.8  0.000000001  Magnetococcus sp. MC-1  Bacteria  normal  0.0888639  normal  0.0279949 
 
 
-
 
NC_007519  Dde_1799  histone-like DNA-binding protein  33.33 
 
 		 91 aa  63.5  0.000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.0000000246385  n/a   
 
 
-
 
NC_008782  Ajs_2470  integration host factor, beta subunit  32.63 
 
 		 103 aa  62.8  0.000000002  Acidovorax sp. JS42  Bacteria  normal  0.391555  normal  0.36333 
 
 
-
 
NC_013173  Dbac_1012  histone family protein DNA-binding protein  32.56 
 
 		 91 aa  62.4  0.000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.000000010655  n/a   
 
 
-
 
NC_011992  Dtpsy_1390  integration host factor, beta subunit  32.63 
 
 		 103 aa  62.8  0.000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.0244556  n/a   
 
 
-
 
NC_011059  Paes_0293  histone family protein DNA-binding protein  32.63 
 
 		 94 aa  62  0.000000003  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.416752  normal  0.0238993 
 
 
-
 
NC_007643  Rru_A0292  integration host factor, beta subunit  31.63 
 
 		 100 aa  61.6  0.000000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.167242  n/a   
 
 
-
 
NC_008752  Aave_3286  histone family protein DNA-binding protein  32.63 
 
 		 109 aa  62  0.000000003  Acidovorax citrulli AAC00-1  Bacteria  hitchhiker  0.00577956  normal  1 
 
 
-
 
NC_007908  Rfer_1565  histone-like DNA-binding protein  31.63 
 
 		 103 aa  61.6  0.000000003  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_1275  histone family protein DNA-binding protein  31.52 
 
 		 91 aa  61.6  0.000000003  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000000292942  n/a   
 
 
-
 
NC_012918  GM21_3008  histone family protein DNA-binding protein  31.52 
 
 		 91 aa  61.6  0.000000003  Geobacter sp. M21  Bacteria  n/a    normal  0.341575 
 
 
-
 
NC_013223  Dret_1900  histone family protein DNA-binding protein  36.78 
 
 		 90 aa  61.2  0.000000004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  0.0802524 
 
 
-
 
NC_013889  TK90_1213  integration host factor, beta subunit  32.63 
 
 		 98 aa  61.6  0.000000004  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0453781  normal  0.184792 
 
 
-
 
NC_008009  Acid345_1185  histone-like DNA-binding protein  33.33 
 
 		 107 aa  61.2  0.000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007498  Pcar_1880  nucleoid DNA-binding protein  36.96 
 
 		 94 aa  60.8  0.000000005  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000000082072  n/a   
 
 
-
 
NC_008609  Ppro_2665  histone family protein DNA-binding protein  29.21 
 
 		 91 aa  61.2  0.000000005  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.00920373  n/a   
 
 
-
 
NC_007948  Bpro_1788  integration host factor, beta subunit  31.25 
 
 		 104 aa  60.8  0.000000006  Polaromonas sp. JS666  Bacteria  normal  1  hitchhiker  0.000860483 
 
 
-
 
NC_012560  Avin_15880  integration host factor subunit beta  36.36 
 
 		 92 aa  60.5  0.000000008  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_2215  histone family protein DNA-binding protein  30.34 
 
 		 95 aa  60.5  0.000000008  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0000076232  n/a   
 
 
-
 
NC_007298  Daro_1281  integration host factor subunit beta  33.7 
 
 		 94 aa  60.1  0.000000009  Dechloromonas aromatica RCB  Bacteria  normal  0.218086  normal  1 
 
 
-
 
NC_010571  Oter_2654  histone family protein DNA-binding protein  36.96 
 
 		 102 aa  60.1  0.000000009  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_0562  integration host factor subunit beta  34.04 
 
 		 102 aa  60.1  0.000000009  Halorhodospira halophila SL1  Bacteria  normal  0.399271  n/a   
 
 
-
 
NC_008751  Dvul_1299  histone family protein DNA-binding protein  33.33 
 
 		 93 aa  60.1  0.000000009  Desulfovibrio vulgaris DP4  Bacteria  normal  0.184081  normal  0.0709018 
 
 
-
 
NC_008781  Pnap_2797  integration host factor, beta subunit  36.62 
 
 		 104 aa  59.7  0.00000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.903901  hitchhiker  0.000129709 
 
 
-
 
NC_007204  Psyc_1994  integration host factor subunit alpha  26.6 
 
 		 99 aa  60.1  0.00000001  Psychrobacter arcticus 273-4  Bacteria  hitchhiker  0.00182495  normal  1 
 
 
-
 
NC_011769  DvMF_1783  histone family protein DNA-binding protein  31.11 
 
 		 91 aa  60.1  0.00000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.464491 
 
 
-
 
NC_007519  Dde_2752  histone-like DNA-binding protein  34.07 
 
 		 91 aa  60.1  0.00000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_007520  Tcr_1199  integration host factor, beta subunit  36.36 
 
 		 108 aa  60.1  0.00000001  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_2074  integration host factor subunit beta  31.52 
 
 		 95 aa  59.7  0.00000001  Shewanella pealeana ATCC 700345  Bacteria  unclonable  0.0000000000549511  n/a   
 
 
-
 
NC_009511  Swit_2409  histone family protein DNA-binding protein  33.71 
 
 		 92 aa  60.1  0.00000001  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.0906126 
 
 
-
 
NC_007969  Pcryo_2297  integration host factor subunit alpha  26.6 
 
 		 99 aa  60.1  0.00000001  Psychrobacter cryohalolentis K5  Bacteria  hitchhiker  0.000285509  normal  0.284194 
 
 
-
 
NC_008009  Acid345_4105  nucleoid protein Hbs  32.22 
 
 		 110 aa  59.7  0.00000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.340401  normal  1 
 
 
-
 
NC_008009  Acid345_4704  histone-like DNA-binding protein  33.33 
 
 		 93 aa  60.1  0.00000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.833222 
 
 
-
 
NC_008609  Ppro_1893  histone family protein DNA-binding protein  33.33 
 
 		 126 aa  59.7  0.00000001  Pelobacter propionicus DSM 2379  Bacteria  normal  0.73585  n/a   
 
 
-
 
NC_011769  DvMF_0500  histone family protein DNA-binding protein  36.26 
 
 		 90 aa  60.1  0.00000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.000759527 
 
 
-
 
NC_011769  DvMF_0558  histone family protein DNA-binding protein  35.56 
 
 		 91 aa  59.7  0.00000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.000235916 
 
 
-
 
NC_008576  Mmc1_1244  histone family protein DNA-binding protein  32.97 
 
 		 91 aa  59.7  0.00000001  Magnetococcus sp. MC-1  Bacteria  normal  0.50556  normal  0.20479 
 
 
-
 
NC_013093  Amir_0860  histone family protein DNA-binding protein  34.44 
 
 		 90 aa  59.3  0.00000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0124999  n/a   
 
 
-
 
NC_009483  Gura_4407  histone family protein DNA-binding protein  30.53 
 
 		 94 aa  59.3  0.00000002  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000192025  n/a   
 
 
-
 
NC_008576  Mmc1_2761  histone family protein DNA-binding protein  30.77 
 
 		 91 aa  59.3  0.00000002  Magnetococcus sp. MC-1  Bacteria  normal  0.680423  normal  0.0712805 
 
 
-
 
NC_011661  Dtur_1514  histone family protein DNA-binding protein  33.33 
 
 		 91 aa  59.3  0.00000002  Dictyoglomus turgidum DSM 6724  Bacteria  decreased coverage  0.0000108882  n/a   
 
 
-
 
NC_007498  Pcar_1686  DNA-binding protein HU-beta, NS1(HU-1)  33.33 
 
 		 90 aa  58.9  0.00000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  6.460310000000001e-19  n/a   
 
 
-
 
NC_008709  Ping_1468  DNA-binding protein HU beta subunit  34.44 
 
 		 91 aa  58.9  0.00000002  Psychromonas ingrahamii 37  Bacteria  normal  0.961834  normal  0.643607 
 
 
-
 
NC_007519  Dde_3356  histone-like DNA-binding protein  36.84 
 
 		 95 aa  58.9  0.00000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.860208  n/a   
 
 
-
 
NC_009972  Haur_3398  histone family protein DNA-binding protein  32.22 
 
 		 92 aa  59.3  0.00000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000223697  n/a   
 
 
-
 
NC_008609  Ppro_1181  histone family protein DNA-binding protein  33.33 
 
 		 92 aa  58.9  0.00000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.42545  n/a   
 
 
-
 
NC_009674  Bcer98_1763  histone family protein DNA-binding protein  32.22 
 
 		 90 aa  59.3  0.00000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.203917  n/a   
 
 
-
 
NC_009656  PSPA7_1968  integration host factor subunit beta  34.04 
 
 		 94 aa  59.3  0.00000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.943011  n/a   
 
 
-
 
NC_008463  PA14_23340  integration host factor subunit beta  34.04 
 
 		 94 aa  59.3  0.00000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000000116436  hitchhiker  0.00519002 
 
 
-
 
NC_009511  Swit_0045  histone family protein DNA-binding protein  32.22 
 
 		 90 aa  58.2  0.00000003  Sphingomonas wittichii RW1  Bacteria  decreased coverage  0.00000165888  normal  1 
 
 
-
 
NC_010511  M446_1007  histone family protein DNA-binding protein  32.65 
 
 		 102 aa  58.5  0.00000003  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_3362  histone family protein DNA-binding protein  31.96 
 
 		 102 aa  58.5  0.00000003  Methylobacterium sp. 4-46  Bacteria  normal  0.936613  normal  1 
 
 
-
 
NC_010513  Xfasm12_1596  integration host factor subunit beta  34.83 
 
 		 111 aa  58.5  0.00000003  Xylella fastidiosa M12  Bacteria  normal  0.878202  n/a   
 
 
-
 
NC_007520  Tcr_1180  histone-like DNA-binding protein  31.11 
 
 		 90 aa  58.5  0.00000003  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  2.95654e-16  n/a   
 
 
-
 
NC_011772  BCG9842_B2983  DNA-binding protein HU  31.11 
 
 		 90 aa  58.5  0.00000003  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011901  Tgr7_1544  integration host factor, beta subunit  34.83 
 
 		 96 aa  58.2  0.00000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.106384  n/a   
 
 
-
 
NC_008783  BARBAKC583_0550  DNA-binding protein HU-beta  32.22 
 
 		 92 aa  58.5  0.00000003  Bartonella bacilliformis KC583  Bacteria  normal  0.169626  n/a   
 
 
-
 
NC_008609  Ppro_1351  histone family protein DNA-binding protein  37.5 
 
 		 92 aa  58.5  0.00000003  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0471037  n/a   
 
 
-
 
NC_011725  BCB4264_A2342  DNA-binding protein HU  31.11 
 
 		 90 aa  58.5  0.00000003  Bacillus cereus B4264  Bacteria  normal  0.868034  n/a   
 
 
-
 
NC_003909  BCE_3756  DNA-binding protein HU  28.89 
 
 		 90 aa  57.8  0.00000004  Bacillus cereus ATCC 10987  Bacteria  unclonable  0.0000000000231467  n/a   
 
 
-
 
NC_011658  BCAH187_A3778  DNA-binding protein HU  28.89 
 
 		 90 aa  57.8  0.00000004  Bacillus cereus AH187  Bacteria  unclonable  0.000000000704337  n/a   
 
 
-
 
NC_005945  BAS3574  DNA-binding protein HU  28.89 
 
 		 90 aa  57.8  0.00000004  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.0000000000204463  n/a   
 
 
-
 
NC_005957  BT9727_3473  DNA-binding protein HU  28.89 
 
 		 90 aa  57.8  0.00000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  1.59147e-20  n/a   
 
 
-
 
NC_006274  BCZK3486  DNA-binding protein HU  28.89 
 
 		 90 aa  57.8  0.00000004  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000148823  n/a   
 
 
-
 
NC_011772  BCG9842_B1474  DNA-binding protein HU  28.89 
 
 		 90 aa  57.8  0.00000004  Bacillus cereus G9842  Bacteria  unclonable  0.000000000112809  hitchhiker  0.00000484208 
 
 
-
 
NC_011725  BCB4264_A3827  DNA-binding protein HU  28.89 
 
 		 90 aa  57.8  0.00000004  Bacillus cereus B4264  Bacteria  unclonable  0.00000818253  n/a   
 
 
-
 
NC_009439  Pmen_1855  integration host factor subunit beta  35.23 
 
 		 95 aa  58.2  0.00000004  Pseudomonas mendocina ymp  Bacteria  normal  0.756472  normal  1 
 
 
-
 
NC_009438  Sputcn32_2041  integration host factor subunit beta  30.43 
 
 		 95 aa  58.2  0.00000004  Shewanella putrefaciens CN-32  Bacteria  unclonable  0.0000000000705182  n/a   
 
 
-
 
NC_007530  GBAA_3858  DNA-binding protein HU  28.89 
 
 		 90 aa  57.8  0.00000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  unclonable  0.0000000000000587043  n/a   
 
 
-
 
NC_011773  BCAH820_3740  DNA-binding protein HU  28.89 
 
 		 90 aa  57.8  0.00000004  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000145695 
 
 
-
 
NC_009674  Bcer98_2403  histone family protein DNA-binding protein  28.89 
 
 		 90 aa  58.2  0.00000004  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.00000000237544  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3494  histone family protein DNA-binding protein  28.89 
 
 		 90 aa  58.2  0.00000004  Bacillus weihenstephanensis KBAB4  Bacteria  decreased coverage  0.00000668206  n/a   
 
 
-
 
NC_010717  PXO_00892  integration host factor subunit beta  32.98 
 
 		 103 aa  57.8  0.00000005  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0417223  n/a   
 
 
-
 
NC_011883  Ddes_1941  histone family protein DNA-binding protein  31.11 
 
 		 91 aa  57.8  0.00000005  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_013422  Hneap_1329  integration host factor, beta subunit  32.95 
 
 		 101 aa  57.8  0.00000005  Halothiobacillus neapolitanus c2  Bacteria  normal  0.0690057  n/a   
 
 
-
 
NC_010727  Mpop_5428  integration host factor, beta subunit  34.09 
 
 		 94 aa  57.8  0.00000005  Methylobacterium populi BJ001  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_2184  histone family protein DNA-binding protein  30 
 
 		 90 aa  57.8  0.00000005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.170143  n/a   
 
 
-
 
NC_007519  Dde_2058  histone-like DNA-binding protein  35.63 
 
 		 90 aa  57.8  0.00000005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.954956  n/a   
 
 
-
 
NC_007520  Tcr_1661  integration host factor, alpha subunit  26.88 
 
 		 97 aa  57.8  0.00000005  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS2213  DNA-binding protein HU  31.11 
 
 		 90 aa  57.4  0.00000006  Bacillus anthracis str. Sterne  Bacteria  normal  0.519209  n/a   
 
 
-
 
NC_006274  BCZK2136  DNA-binding protein HU  31.11 
 
 		 90 aa  57.4  0.00000006  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_2395  DNA-binding protein HU  31.11 
 
 		 90 aa  57.4  0.00000006  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_010577  XfasM23_1539  integration host factor subunit beta  32.98 
 
 		 104 aa  57.4  0.00000006  Xylella fastidiosa M23  Bacteria  normal  0.874704  n/a   
 
 
-
 
NC_012912  Dd1591_2338  integration host factor subunit beta  34.09 
 
 		 94 aa  57.4  0.00000006  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.0023848  n/a   
 
 
-
 
NC_007530  GBAA_2377  DNA-binding protein HU  31.11 
 
 		 90 aa  57.4  0.00000006  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
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