| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0550 |
|---|
| Symbol | hupB |
|---|
| ID | 4684592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | + |
|---|
| Start bp | 562856 |
|---|
| End bp | 563134 |
|---|
| Gene Length | 279 bp |
|---|
| Protein Length | 92 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639841740 |
|---|
| Product | DNA-binding protein HU-beta |
|---|
| Protein accession | YP_988864 |
|---|
| Protein GI | 121602375 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 0.169626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA GTGAATTGGT TAACTCCATT GCTGCAAAAG CAGGTGTCTC AAAAGCACAA
GCTGGTTCTG TTTTAGATGC CTTTATTGCT TCTGTAACAG AAGCTTTAGG AGAAGGGGGT
GATGTGCGTC TTCCAGGTTT TGGTTCTTTT GAAGTTTCTC GGCGTGCTGC TACAAAGGGA
CGTAACCCTT CGACAGGTGC AGAAATTAAT ATTCCAGCGC GTTCTGTCCC TAAGTTTTCT
GCAGGAAAAA ATCTTAAAGA AGCTGTTAAT AAACGGTAA
|
|---|
| Protein sequence | MNKSELVNSI AAKAGVSKAQ AGSVLDAFIA SVTEALGEGG DVRLPGFGSF EVSRRAATKG
RNPSTGAEIN IPARSVPKFS AGKNLKEAVN KR
|
|---|
| |